Information for 10-CCMAGACAGTAAAYTA (Motif 18)

A G T C G T A C G T A C C T G A A C T G T C G A T G A C C G T A A C T G A C G T C G T A C G T A G T C A A G C T C G A T T G C A
Reverse Opposite:
A C G T G C T A C T G A A C G T A C G T A C G T T G C A A G T C C G A T A C T G A G C T A G T C A G C T A C T G A C T G A C T G
p-value:1e-11
log p-value:-2.576e+01
Information Content per bp:1.753
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.8 +/- 24.8bp
Average Position of motif in Background79.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:CCMAGACAGTAAAYTA
----NACAGGAAAT--
 A G T C G T A C G T A C C T G A A C T G T C G A T G A C C G T A A C T G A C G T C G T A C G T A G T C A A G C T C G A T T G C A
A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.64
Offset:4
Orientation:forward strand
Alignment:CCMAGACAGTAAAYTA
----NACAGGAAAT--
 A G T C G T A C G T A C C T G A A C T G T C G A T G A C C G T A A C T G A C G T C G T A C G T A G T C A A G C T C G A T T G C A
A C G T A C G T A C G T A C G T T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:3
Score:0.60
Offset:5
Orientation:forward strand
Alignment:CCMAGACAGTAAAYTA
-----ACAGGAAGTG-
 A G T C G T A C G T A C C T G A A C T G T C G A T G A C C G T A A C T G A C G T C G T A C G T A G T C A A G C T C G A T T G C A
A C G T A C G T A C G T A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CCMAGACAGTAAAYTA
CAAATCCAGACATCACA---
 A C G T A C G T A C G T A C G T A G T C G T A C G T A C C T G A A C T G T C G A T G A C C G T A A C T G A C G T C G T A C G T A G T C A A G C T C G A T T G C A
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CCMAGACAGTAAAYTA
-CCAGACAG-------
 A G T C G T A C G T A C C T G A A C T G T C G A T G A C C G T A A C T G A C G T C G T A C G T A G T C A A G C T C G A T T G C A
A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0015.1_Foxa2_1/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CCMAGACAGTAAAYTA----
---AAAAAGTAAACAAAGAC
 A G T C G T A C G T A C C T G A A C T G T C G A T G A C C G T A A C T G A C G T C G T A C G T A G T C A A G C T C G A T T G C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CCMAGACAGTAAAYTA
----AACAGGAAGT--
 A G T C G T A C G T A C C T G A A C T G T C G A T G A C C G T A A C T G A C G T C G T A C G T A G T C A A G C T C G A T T G C A
A C G T A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T A C G T

Foxj3/MA0851.1/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CCMAGACAGTAAAYTA----
---AAAAAGTAAACAAACAC
 A G T C G T A C G T A C C T G A A C T G T C G A T G A C C G T A A C T G A C G T C G T A C G T A G T C A A G C T C G A T T G C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0017.1_Foxj3_1/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CCMAGACAGTAAAYTA----
---AAAAAGTAAACAAACAC
 A G T C G T A C G T A C C T G A A C T G T C G A T G A C C G T A A C T G A C G T C G T A C G T A G T C A A G C T C G A T T G C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0041.1_Mafb_1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CCMAGACAGTAAAYTA
NCTANGTCAGCAAATTT
 A C G T A G T C G T A C G T A C C T G A A C T G T C G A T G A C C G T A A C T G A C G T C G T A C G T A G T C A A G C T C G A T T G C A
C A G T G A T C A G C T C G T A G C T A T C A G A C G T G T A C C G T A C A T G G A T C C G T A G T C A C G T A G C A T G A C T C G A T