Information for 9-TTATGATCAT (Motif 30)

A C G T A C G T C G T A A C G T A C T G C G T A C G A T A T G C G T C A G A C T
Reverse Opposite:
C T G A A C G T A T C G C G T A A C G T A G T C C G T A A C G T G T C A G T C A
p-value:1e-7
log p-value:-1.742e+01
Information Content per bp:1.838
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif3.46%
Number of Background Sequences with motif429.9
Percentage of Background Sequences with motif0.88%
Average Position of motif in Targets51.3 +/- 22.9bp
Average Position of motif in Background52.0 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0017.1_Cux1_2/Jaspar

Match Rank:1
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---TTATGATCAT--
TAATGATGATCACTA
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G C G T A C G A T A T G C G T C A G A C T A C G T A C G T
C G A T T G C A T C G A A G C T C A T G G C T A C G A T C T A G C G T A C A G T G A T C T C G A G T A C C G A T C G T A

PB0174.1_Sox30_2/Jaspar

Match Rank:2
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----TTATGATCAT-
NCGTATTATAATCNTA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G C G T A C G A T A T G C G T C A G A C T A C G T
A T G C A G T C A C T G A C G T G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G A C G C A T C A G T C T G A

HOXC10/MA0905.1/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TTATGATCAT
NTTTTACGAC---
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G C G T A C G A T A T G C G T C A G A C T
C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C A C G T A C G T A C G T

PB0176.1_Sox5_2/Jaspar

Match Rank:4
Score:0.66
Offset:-7
Orientation:reverse strand
Alignment:-------TTATGATCAT
NNCTNAATTATGANN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G C G T A C G A T A T G C G T C A G A C T
G A C T G A T C A T G C A C G T G C A T C T G A C G T A C G A T A C G T G T C A G A C T T C A G G C T A C G A T G C T A A C G T A C G T

PB0079.1_Sry_1/Jaspar

Match Rank:5
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----TTATGATCAT-
TATAATTATAATATTC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G C G T A C G A T A T G C G T C A G A C T A C G T
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C

Hoxa11/MA0911.1/Jaspar

Match Rank:6
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TTATGATCAT
ANTTTTACGACC--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G C G T A C G A T A T G C G T C A G A C T
G C T A C G T A C G A T C G A T G C A T G C A T G C T A G A T C C T A G T C G A A G T C G A T C A C G T A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:7
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TTATGATCAT
-CATGAC---
 A C G T A C G T C G T A A C G T A C T G C G T A C G A T A T G C G T C A G A C T
A C G T T A G C T C G A A C G T C A T G C G T A A G T C A C G T A C G T A C G T

PH0012.1_Cdx1/Jaspar

Match Rank:8
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----TTATGATCAT-
NAATTTTATTACCTNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G C G T A C G A T A T G C G T C A G A C T A C G T
C G A T G T C A T C G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T G A C T G C T A

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:9
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TTATGATCAT
NTTTTATGAC---
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G C G T A C G A T A T G C G T C A G A C T
C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C A C G T A C G T A C G T

PB0069.1_Sox21_1/Jaspar

Match Rank:10
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----TTATGATCAT-
NNTAATTATAATNANN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G C G T A C G A T A T G C G T C A G A C T A C G T
G T A C G C A T G C A T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C G T A