Information for 2-WCAAATTTTSSCTGHA (Motif 3)

C G A T A G T C G C T A C T G A C T G A C G A T C G A T C A G T A C G T A T C G A T G C G T A C C G A T A C T G G A T C G T C A
Reverse Opposite:
C A G T C T A G G T A C C G T A A C T G T A C G T A G C G T C A G T C A G C T A C G T A A G C T G A C T C G A T T C A G C G T A
p-value:1e-12
log p-value:-2.815e+01
Information Content per bp:1.607
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.59%
Number of Background Sequences with motif123.4
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets50.7 +/- 23.9bp
Average Position of motif in Background46.2 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:1
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----WCAAATTTTSSCTGHA
NTGACTCANTTTTTCCANTN-
 A C G T A C G T A C G T A C G T A C G T C G A T A G T C G C T A C T G A C T G A C G A T C G A T C A G T A C G T A T C G A T G C G T A C C G A T A C T G G A T C G T C A
T C G A G C A T A C T G C G T A A T G C G C A T G T A C C G T A A G C T G C A T A G C T A G C T G A C T A G C T A G T C A G T C G C T A A G C T G A C T A T G C A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:2
Score:0.54
Offset:4
Orientation:forward strand
Alignment:WCAAATTTTSSCTGHA
----ATTTTCCATT--
 C G A T A G T C G C T A C T G A C T G A C G A T C G A T C A G T A C G T A T C G A T G C G T A C C G A T A C T G G A T C G T C A
A C G T A C G T A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.54
Offset:4
Orientation:forward strand
Alignment:WCAAATTTTSSCTGHA
----ACTTTCACTTTC
 C G A T A G T C G C T A C T G A C T G A C G A T C G A T C A G T A C G T A T C G A T G C G T A C C G A T A C T G G A T C G T C A
A C G T A C G T A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

Arid5a/MA0602.1/Jaspar

Match Rank:4
Score:0.52
Offset:1
Orientation:forward strand
Alignment:WCAAATTTTSSCTGHA
-CTAATATTGCTAAA-
 C G A T A G T C G C T A C T G A C T G A C G A T C G A T C A G T A C G T A T C G A T G C G T A C C G A T A C T G G A T C G T C A
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:5
Score:0.52
Offset:1
Orientation:forward strand
Alignment:WCAAATTTTSSCTGHA
-CTAATATTGCTAAA-
 C G A T A G T C G C T A C T G A C T G A C G A T C G A T C A G T A C G T A T C G A T G C G T A C C G A T A C T G G A T C G T C A
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A A C G T

IRF7/MA0772.1/Jaspar

Match Rank:6
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:WCAAATTTTSSCTGHA--
----ANTTTCGCTTTCGN
 C G A T A G T C G C T A C T G A C T G A C G A T C G A T C A G T A C G T A T C G A T G C G T A C C G A T A C T G G A T C G T C A A C G T A C G T
A C G T A C G T A C G T A C G T C G T A A G T C C G A T A C G T C A G T G A T C C T A G A G T C A C G T C G A T A C G T T G A C A C T G C A G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:7
Score:0.51
Offset:4
Orientation:forward strand
Alignment:WCAAATTTTSSCTGHA
----ATTTTCCATT--
 C G A T A G T C G C T A C T G A C T G A C G A T C G A T C A G T A C G T A T C G A T G C G T A C C G A T A C T G G A T C G T C A
A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T A C G T A C G T

PH0107.1_Msx2/Jaspar

Match Rank:8
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----WCAAATTTTSSCTGHA
GAAGACCAATTAGCGCT---
 A C G T A C G T A C G T A C G T C G A T A G T C G C T A C T G A C T G A C G A T C G A T C A G T A C G T A T C G A T G C G T A C C G A T A C T G G A T C G T C A
T C A G T G C A C T G A T A C G C T G A A T G C G A T C C G T A G T C A C G A T G A C T C T G A C A T G G A T C C A T G G A T C A G C T A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:9
Score:0.50
Offset:1
Orientation:forward strand
Alignment:WCAAATTTTSSCTGHA
-CTCATTGTC------
 C G A T A G T C G C T A C T G A C T G A C G A T C G A T C A G T A C G T A T C G A T G C G T A C C G A T A C T G G A T C G T C A
A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T A C G T A C G T A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:10
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--WCAAATTTTSSCTGHA
GGAAAAATTGTTAGGAA-
 A C G T A C G T C G A T A G T C G C T A C T G A C T G A C G A T C G A T C A G T A C G T A T C G A T G C G T A C C G A T A C T G G A T C G T C A
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A A C G T