Information for 15-ATTCAATCCAAGG (Motif 29)

C G T A A C G T G A C T G A T C G T C A G T C A A C G T G T A C G A T C G C T A C T G A C A T G A C T G
Reverse Opposite:
G T A C G A T C G A C T C A G T C A T G A C T G T C G A C A G T C A G T C T A G C T G A T C G A G C A T
p-value:1e-7
log p-value:-1.775e+01
Information Content per bp:1.664
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.02%
Number of Background Sequences with motif137.9
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets59.4 +/- 23.5bp
Average Position of motif in Background50.2 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:1
Score:0.60
Offset:6
Orientation:forward strand
Alignment:ATTCAATCCAAGG---
------NTCAAGGTCA
 C G T A A C G T G A C T G A T C G T C A G T C A A C G T G T A C G A T C G C T A C T G A C A T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

PB0068.1_Sox1_1/Jaspar

Match Rank:2
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----ATTCAATCCAAGG
AATCAATTCAATAATT--
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T G A C T G A T C G T C A G T C A A C G T G T A C G A T C G C T A C T G A C A T G A C T G
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:3
Score:0.58
Offset:6
Orientation:forward strand
Alignment:ATTCAATCCAAGG---
------BTCAAGGTCA
 C G T A A C G T G A C T G A T C G T C A G T C A A C G T G T A C G A T C G C T A C T G A C A T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:4
Score:0.57
Offset:8
Orientation:forward strand
Alignment:ATTCAATCCAAGG-----
--------CAAGGHCANV
 C G T A A C G T G A C T G A T C G T C A G T C A A C G T G T A C G A T C G C T A C T G A C A T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

PB0078.1_Srf_1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:ATTCAATCCAAGG--
-TNCCATATATGGNA
 C G T A A C G T G A C T G A T C G T C A G T C A A C G T G T A C G A T C G C T A C T G A C A T G A C T G A C G T A C G T
A C G T C A G T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A C G A T C T A G C A T G C G T A C G T A

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:ATTCAATCCAAGG
-TNCCATATATGG
 C G T A A C G T G A C T G A T C G T C A G T C A A C G T G T A C G A T C G C T A C T G A C A T G A C T G
A C G T C A G T A C T G G A T C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G A T C G

Nr5a2/MA0505.1/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:forward strand
Alignment:ATTCAATCCAAGG-----
---AAGTTCAAGGTCAGC
 C G T A A C G T G A C T G A T C G T C A G T C A A C G T G T A C G A T C G C T A C T G A C A T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

PB0014.1_Esrra_1/Jaspar

Match Rank:8
Score:0.55
Offset:4
Orientation:forward strand
Alignment:ATTCAATCCAAGG--------
----TATTCAAGGTCATGCGA
 C G T A A C G T G A C T G A T C G T C A G T C A A C G T G T A C G A T C G C T A C T G A C A T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

PB0040.1_Lef1_1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:ATTCAATCCAAGG----
NANAGATCAAAGGGNNN
 C G T A A C G T G A C T G A T C G T C A G T C A A C G T G T A C G A T C G C T A C T G A C A T G A C T G A C G T A C G T A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

PB0082.1_Tcf3_1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:ATTCAATCCAAGG----
TATAGATCAAAGGAAAA
 C G T A A C G T G A C T G A T C G T C A G T C A A C G T G T A C G A T C G C T A C T G A C A T G A C T G A C G T A C G T A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A