Information for 12-TCACAATGAGGGC (Motif 22)

A C G T A G T C G T C A A G T C C G T A C T G A A C G T A C T G C G T A A C T G A C T G A T C G A G T C
Reverse Opposite:
A C T G A T G C A G T C A G T C A C G T A G T C C G T A A G C T A C G T A C T G A C G T A C T G G T C A
p-value:1e-8
log p-value:-2.021e+01
Information Content per bp:1.934
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets68.0 +/- 13.6bp
Average Position of motif in Background84.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17/MA0078.1/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TCACAATGAGGGC
-GACAATGNN---
 A C G T A G T C G T C A A G T C C G T A C T G A A C G T A C T G C G T A A C T G A C T G A T C G A G T C
A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TCACAATGAGGGC-
NNTNNACAATGGGANNN
 A C G T A C G T A C G T A C G T A G T C G T C A A G T C C G T A C T G A A C G T A C T G C G T A A C T G A C T G A T C G A G T C A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

SOX10/MA0442.1/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TCACAATGAGGGC
--ACAAAG-----
 A C G T A G T C G T C A A G T C C G T A C T G A A C G T A C T G C G T A A C T G A C T G A T C G A G T C
A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TCACAATGAGGGC
CTCACACAATGGCGC-
 A C G T A C G T A C G T A C G T A G T C G T C A A G T C C G T A C T G A A C G T A C T G C G T A A C T G A C T G A T C G A G T C
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C A C G T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TCACAATGAGGGC--
AAACATAATGAGGTTGC
 A C G T A C G T A C G T A G T C G T C A A G T C C G T A C T G A A C G T A C T G C G T A A C T G A C T G A T C G A G T C A C G T A C G T
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TCACAATGAGGGC-
--ACAAAGGNBCCT
 A C G T A G T C G T C A A G T C C G T A C T G A A C G T A C T G C G T A A C T G A C T G A T C G A G T C A C G T
A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

THAP1/MA0597.1/Jaspar

Match Rank:7
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:TCACAATGAGGGC--
------TNNGGGCAG
 A C G T A G T C G T C A A G T C C G T A C T G A A C G T A C T G C G T A A C T G A C T G A T C G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TCACAATGAGGGC
VRRACAAWGG----
 A C G T A C G T A G T C G T C A A G T C C G T A C T G A A C G T A C T G C G T A A C T G A C T G A T C G A G T C
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

PB0172.1_Sox1_2/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TCACAATGAGGGC
NNNTAACAATTATAN-
 A C G T A C G T A C G T A C G T A G T C G T C A A G T C C G T A C T G A A C G T A C T G C G T A A C T G A C T G A T C G A G T C
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G A C G T

GCM2/MA0767.1/Jaspar

Match Rank:10
Score:0.56
Offset:4
Orientation:forward strand
Alignment:TCACAATGAGGGC-
----TATGCGGGTA
 A C G T A G T C G T C A A G T C C G T A C T G A A C G T A C T G C G T A A C T G A C T G A T C G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A