Information for 9-TGCTTAGGGGTAA (Motif 17)

A C G T C T A G A T G C A G C T C A G T G C T A C A T G C A T G A C T G T A C G C A G T G T C A G T C A
Reverse Opposite:
C A G T C A G T G C T A A T G C A G T C G T A C G T A C C A G T G T C A T C G A T A C G A G T C C G T A
p-value:1e-9
log p-value:-2.103e+01
Information Content per bp:1.685
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.73%
Number of Background Sequences with motif70.3
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets46.5 +/- 26.0bp
Average Position of motif in Background47.2 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:1
Score:0.70
Offset:3
Orientation:forward strand
Alignment:TGCTTAGGGGTAA
---GGAGGGGGAA
 A C G T C T A G A T G C A G C T C A G T G C T A C A T G C A T G A C T G T A C G C A G T G T C A G T C A
A C G T A C G T A C G T A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A

PB0118.1_Esrra_2/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TGCTTAGGGGTAA-----
-GGCGAGGGGTCAAGGGC
 A C G T C T A G A T G C A G C T C A G T G C T A C A T G C A T G A C T G T A C G C A G T G T C A G T C A A C G T A C G T A C G T A C G T A C G T
A C G T T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

PB0057.1_Rxra_1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TGCTTAGGGGTAA-----
-NTNNNGGGGTCANGNNN
 A C G T C T A G A T G C A G C T C A G T G C T A C A T G C A T G A C T G T A C G C A G T G T C A G T C A A C G T A C G T A C G T A C G T A C G T
A C G T T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

PB0030.1_Hnf4a_1/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TGCTTAGGGGTAA-----
-CTCCAGGGGTCAATTGA
 A C G T C T A G A T G C A G C T C A G T G C T A C A T G C A T G A C T G T A C G C A G T G T C A G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:5
Score:0.59
Offset:5
Orientation:forward strand
Alignment:TGCTTAGGGGTAA
-----AGRGGTCA
 A C G T C T A G A T G C A G C T C A G T G C T A C A T G C A T G A C T G T A C G C A G T G T C A G T C A
A C G T A C G T A C G T A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A

PB0156.1_Plagl1_2/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TGCTTAGGGGTAA-----
-GCTGGGGGGTACCCCTT
 A C G T C T A G A T G C A G C T C A G T G C T A C A T G C A T G A C T G T A C G C A G T G T C A G T C A A C G T A C G T A C G T A C G T A C G T
A C G T C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T

PB0114.1_Egr1_2/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TGCTTAGGGGTAA---
TGCGGAGTGGGACTGG
 A C G T C T A G A T G C A G C T C A G T G C T A C A T G C A T G A C T G T A C G C A G T G T C A G T C A A C G T A C G T A C G T
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGCTTAGGGGTAA
TGCCCNGGGGCA-
 A C G T C T A G A T G C A G C T C A G T G C T A C A T G C A T G A C T G T A C G C A G T G T C A G T C A
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A A C G T

RREB1/MA0073.1/Jaspar

Match Rank:9
Score:0.54
Offset:-10
Orientation:reverse strand
Alignment:----------TGCTTAGGGGTAA
NGGGGGGGGGTGGTTTGGGG---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A T G C A G C T C A G T G C T A C A T G C A T G A C T G T A C G C A G T G T C A G T C A
A C G T A T C G C A T G A C T G C A T G A C T G A C T G A C T G A C T G A C T G A C G T A C T G C A T G A C G T A C G T A C G T A C T G A C T G A C T G A C T G A C G T A C G T A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGCTTAGGGGTAA
TGCCCTNGGGCA-
 A C G T C T A G A T G C A G C T C A G T G C T A C A T G C A T G A C T G T A C G C A G T G T C A G T C A
G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A A C G T