Information for 7-AGTCTAATGCTGC (Motif 13)

C G T A T A C G C G A T G A T C C G A T C G T A G T C A A C G T A C T G G T A C A C G T C T A G T A G C
Reverse Opposite:
A T C G A G T C C G T A A C T G T G A C C G T A A C G T A C G T C G T A C A T G C G T A A T G C A C G T
p-value:1e-10
log p-value:-2.431e+01
Information Content per bp:1.754
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.15%
Number of Background Sequences with motif13.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets39.6 +/- 26.0bp
Average Position of motif in Background55.8 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:1
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:AGTCTAATGCTGC
---YTAATCCY--
 C G T A T A C G C G A T G A T C C G A T C G T A G T C A A C G T A C T G G T A C A C G T C T A G T A G C
A C G T A C G T A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:2
Score:0.62
Offset:4
Orientation:forward strand
Alignment:AGTCTAATGCTGC
----TAATCCCN-
 C G T A T A C G C G A T G A T C C G A T C G T A G T C A A C G T A C T G G T A C A C G T C T A G T A G C
A C G T A C G T A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G A C G T

OTX2/MA0712.1/Jaspar

Match Rank:3
Score:0.62
Offset:3
Orientation:forward strand
Alignment:AGTCTAATGCTGC
---TTAATCCT--
 C G T A T A C G C G A T G A T C C G A T C G T A G T C A A C G T A C T G G T A C A C G T C T A G T A G C
A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AGTCTAATGCTGC
--NYTAATCCYB-
 C G T A T A C G C G A T G A T C C G A T C G T A G T C A A C G T A C T G G T A C A C G T C T A G T A G C
A C G T A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:5
Score:0.60
Offset:3
Orientation:forward strand
Alignment:AGTCTAATGCTGC
---TTAATCCC--
 C G T A T A C G C G A T G A T C C G A T C G T A G T C A A C G T A C T G G T A C A C G T C T A G T A G C
A C G T A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AGTCTAATGCTGC----
--AAAWWTGCTGACWWD
 C G T A T A C G C G A T G A T C C G A T C G T A G T C A A C G T A C T G G T A C A C G T C T A G T A G C A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C G T A C G T A G C T A G C A T G C A T T C A G G T A C G C A T C A T G C G T A A T G C G C A T G C A T C A T G

Dmbx1/MA0883.1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGTCTAATGCTGC---
NNNATTAATCCGNTTNA
 A C G T C G T A T A C G C G A T G A T C C G A T C G T A G T C A A C G T A C T G G T A C A C G T C T A G T A G C A C G T A C G T A C G T
G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGTCTAATGCTGC---
NNNATTAATCCGNTTNA
 A C G T C G T A T A C G C G A T G A T C C G A T C G T A G T C A A C G T A C T G G T A C A C G T C T A G T A G C A C G T A C G T A C G T
G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A

HOXA5/MA0158.1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AGTCTAATGCTGC
-CACTAATT----
 C G T A T A C G C G A T G A T C C G A T C G T A G T C A A C G T A C T G G T A C A C G T C T A G T A G C
A C G T G T A C C T G A A T G C C G A T C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AGTCTAATGCTGC
--CTTAATCCC--
 C G T A T A C G C G A T G A T C C G A T C G T A G T C A A C G T A C T G G T A C A C G T C T A G T A G C
A C G T A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T A C G T