Information for 10-MAYTATTMRWMMCAGT (Motif 11)

G T A C C G T A A G C T A C G T C G T A C G A T A C G T G T C A C T G A C G A T T G C A G T C A A G T C C G T A A C T G A C G T
Reverse Opposite:
C G T A G T A C A C G T A C T G A C G T A C G T C G T A A G C T A C G T G T C A C G T A A C G T C G T A C T G A A C G T C A T G
p-value:1e-11
log p-value:-2.585e+01
Information Content per bp:1.812
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif6.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets63.7 +/- 24.9bp
Average Position of motif in Background31.6 +/- 17.1bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0010.1_Homeobox_class/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:MAYTATTMRWMMCAGT
AATTATT---------
 G T A C C G T A A G C T A C G T C G T A C G A T A C G T G T C A C T G A C G A T T G C A G T C A A G T C C G T A A C T G A C G T
G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:MAYTATTMRWMMCAGT
GAATATTCAT------
 G T A C C G T A A G C T A C G T C G T A C G A T A C G T G T C A C T G A C G A T T G C A G T C A A G T C C G T A A C T G A C G T
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:MAYTATTMRWMMCAGT
CCGTATTATAAACAA-
 G T A C C G T A A G C T A C G T C G T A C G A T A C G T G T C A C T G A C G A T T G C A G T C A A G T C C G T A A C T G A C G T
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A A C G T

PH0018.1_Dbx1/Jaspar

Match Rank:4
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----MAYTATTMRWMMCAGT
TAATTAATTAATAATTA----
 A C G T A C G T A C G T A C G T A C G T G T A C C G T A A G C T A C G T C G T A C G A T A C G T G T C A C T G A C G A T T G C A G T C A A G T C C G T A A C T G A C G T
G A C T G C T A C T G A G C A T G C A T G C T A C G T A G C A T G C A T C G T A G C T A G C A T C G T A T C G A C G A T C G A T C T G A A C G T A C G T A C G T A C G T

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:5
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:MAYTATTMRWMMCAGT
-NNAATTAGTCACGGT
 G T A C C G T A A G C T A C G T C G T A C G A T A C G T G T C A C T G A C G A T T G C A G T C A A G T C C G T A A C T G A C G T
A C G T A G C T G A T C T C G A C G T A A C G T A G C T C G T A A C T G G A C T G A T C G T C A G A T C C T A G A T C G G C A T

Arid5a/MA0602.1/Jaspar

Match Rank:6
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----MAYTATTMRWMMCAGT
NNTNNCAATATTAG-------
 A C G T A C G T A C G T A C G T A C G T G T A C C G T A A G C T A C G T C G T A C G A T A C G T G T C A C T G A C G A T T G C A G T C A A G T C C G T A A C T G A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:7
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----MAYTATTMRWMMCAGT
NNTNNCAATATTAG-------
 A C G T A C G T A C G T A C G T A C G T G T A C C G T A A G C T A C G T C G T A C G A T A C G T G T C A C T G A C G A T T G C A G T C A A G T C C G T A A C T G A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--MAYTATTMRWMMCAGT
TGAATTATGCAT------
 A C G T A C G T G T A C C G T A A G C T A C G T C G T A C G A T A C G T G T C A C T G A C G A T T G C A G T C A A G T C C G T A A C T G A C G T
C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

POU4F3/MA0791.1/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---MAYTATTMRWMMCAGT
ATGCATAATTAATGAG---
 A C G T A C G T A C G T G T A C C G T A A G C T A C G T C G T A C G A T A C G T G T C A C T G A C G A T T G C A G T C A A G T C C G T A A C T G A C G T
C T G A A G C T C A T G G T A C G C T A C G A T C G T A C G T A C G A T C G A T C G T A C T G A G A C T C A T G G T C A T C A G A C G T A C G T A C G T

PH0063.1_Hoxb8/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:MAYTATTMRWMMCAGT-
-TTTATTAATTGCNNGN
 G T A C C G T A A G C T A C G T C G T A C G A T A C G T G T C A C T G A C G A T T G C A G T C A A G T C C G T A A C T G A C G T A C G T
A C G T G C A T G A C T A C G T C T G A C G A T G C A T C G T A C G T A A C G T C A G T C T A G G A T C G T A C T C A G A T C G C G A T