Information for 2-GRGCCAGGGACGCCGG (Motif 2)

A T C G C T G A A C T G A G T C A G T C C G T A A C T G A C T G A C T G C G T A A T G C A T C G A G T C A G T C A T C G T A C G
Reverse Opposite:
A T G C A T G C A C T G A C T G A T G C A T C G C G A T G T A C A G T C A G T C C G A T C T A G A C T G A G T C A G C T A T G C
p-value:1e-11
log p-value:-2.746e+01
Information Content per bp:1.790
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.4 +/- 21.6bp
Average Position of motif in Background54.9 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:1
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GRGCCAGGGACGCCGG
-TGCCTGCGYCMCCTT
 A T C G C T G A A C T G A G T C A G T C C G T A A C T G A C T G A C T G C G T A A T G C A T C G A G T C A G T C A T C G T A C G
A C G T C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:2
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GRGCCAGGGACGCCGG---
---NNNGGGGCGCCCCCNN
 A T C G C T G A A C T G A G T C A G T C C G T A A C T G A C T G A C T G C G T A A T G C A T C G A G T C A G T C A T C G T A C G A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GRGCCAGGGACGCCGG
CGTGCCAAG--------
 A C G T A T C G C T G A A C T G A G T C A G T C C G T A A C T G A C T G A C T G C G T A A T G C A T C G A G T C A G T C A T C G T A C G
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:4
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:GRGCCAGGGACGCCGG
---NRRGGGTCTT---
 A T C G C T G A A C T G A G T C A G T C C G T A A C T G A C T G A C T G C G T A A T G C A T C G A G T C A G T C A T C G T A C G
A C G T A C G T A C G T A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T A C G T

PB0094.1_Zfp128_1/Jaspar

Match Rank:5
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:GRGCCAGGGACGCCGG---
--TTNGGGTACGCCNNANN
 A T C G C T G A A C T G A G T C A G T C C G T A A C T G A C T G A C T G C G T A A T G C A T C G A G T C A G T C A T C G T A C G A C G T A C G T A C G T
A C G T A C G T G A C T C A G T C T G A T C A G A T C G A C T G A C G T C G T A A G T C C T A G G A T C G T A C G T C A G T C A C G T A C T A G T G C A

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:GRGCCAGGGACGCCGG
-TGCCAA---------
 A T C G C T G A A C T G A G T C A G T C C G T A A C T G A C T G A C T G C G T A A T G C A T C G A G T C A G T C A T C G T A C G
A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:7
Score:0.49
Offset:3
Orientation:forward strand
Alignment:GRGCCAGGGACGCCGG
---VCAGGTRDRY---
 A T C G C T G A A C T G A G T C A G T C C G T A A C T G A C T G A C T G C G T A A T G C A T C G A G T C A G T C A T C G T A C G
A C G T A C G T A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:8
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:GRGCCAGGGACGCCGG
-NGCCTGAGGCN----
 A T C G C T G A A C T G A G T C A G T C C G T A A C T G A C T G A C T G C G T A A T G C A T C G A G T C A G T C A T C G T A C G
A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:9
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-GRGCCAGGGACGCCGG
AGCAACAGCCGCACC--
 A C G T A T C G C T G A A C T G A G T C A G T C C G T A A C T G A C T G A C T G C G T A A T G C A T C G A G T C A G T C A T C G T A C G
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.47
Offset:3
Orientation:forward strand
Alignment:GRGCCAGGGACGCCGG
---CCAGGAACAG---
 A T C G C T G A A C T G A G T C A G T C C G T A A C T G A C T G A C T G C G T A A T G C A T C G A G T C A G T C A T C G T A C G
A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T