Information for 8-CCCCGCGGGCGGS (Motif 12)

G A T C A T G C G T A C A G T C A C T G A G T C A T C G A T C G A T C G G T A C C T A G A C T G A T C G
Reverse Opposite:
A T G C A G T C A G T C A C T G A T G C T A G C A T G C A C T G T A G C C T A G A C T G A T C G C T A G
p-value:1e-8
log p-value:-1.960e+01
Information Content per bp:1.750
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.48%
Number of Background Sequences with motif67.6
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets57.9 +/- 16.3bp
Average Position of motif in Background45.1 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0103.1_Zic3_1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CCCCGCGGGCGGS-
CCCCCCCGGGGGGGT
 A C G T G A T C A T G C G T A C A G T C A C T G A G T C A T C G A T C G A T C G G T A C C T A G A C T G A T C G A C G T
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CCCCGCGGGCGGS
TGCCCCCGGGCA--
 A C G T G A T C A T G C G T A C A G T C A C T G A G T C A T C G A T C G A T C G G T A C C T A G A C T G A T C G
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CCCCGCGGGCGGS-
CCCCCCCGGGGGGGT
 A C G T G A T C A T G C G T A C A G T C A C T G A G T C A T C G A T C G A T C G G T A C C T A G A C T G A T C G A C G T
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CCCCGCGGGCGGS
CACCCCCGGGGGGG
 A C G T G A T C A T G C G T A C A G T C A C T G A G T C A T C G A T C G A T C G G T A C C T A G A C T G A T C G
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G

TFAP2B/MA0811.1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CCCCGCGGGCGGS
TGCCCCAGGGCA--
 A C G T G A T C A T G C G T A C A G T C A C T G A G T C A T C G A T C G A T C G G T A C C T A G A C T G A T C G
G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CCCCGCGGGCGGS
NNTTCCCGCCC-----
 A C G T A C G T A C G T G A T C A T G C G T A C A G T C A C T G A G T C A T C G A T C G A T C G G T A C C T A G A C T G A T C G
A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C A C G T A C G T A C G T A C G T A C G T

TFAP2C/MA0524.2/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CCCCGCGGGCGGS
TGCCCCAGGGCA--
 A C G T G A T C A T G C G T A C A G T C A C T G A G T C A T C G A T C G A T C G G T A C C T A G A C T G A T C G
G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CCCCGCGGGCGGS-
GCCCCGCCCCCTCCC
 A C G T G A T C A T G C G T A C A G T C A C T G A G T C A T C G A T C G A T C G G T A C C T A G A C T G A T C G A C G T
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:9
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CCCCGCGGGCGGS
TTCCCGCCWG----
 A C G T G A T C A T G C G T A C A G T C A C T G A G T C A T C G A T C G A T C G G T A C C T A G A C T G A T C G
A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G A C G T A C G T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CCCCGCGGGCGGS
NYTTCCCGCC------
 A C G T A C G T A C G T G A T C A T G C G T A C A G T C A C T G A G T C A T C G A T C G A T C G G T A C C T A G A C T G A T C G
T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T