Information for 4-CTCCCTGCCCACA (Motif 9)

A G T C A C G T A T G C A G T C A T G C A C G T A C T G A G T C A T G C G T A C G T C A A G T C G T C A
Reverse Opposite:
A C G T C T A G A C G T A C T G A T C G A C T G A G T C G T C A A T C G A C T G A T C G C G T A A C T G
p-value:1e-7
log p-value:-1.837e+01
Information Content per bp:1.806
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.69%
Number of Background Sequences with motif19.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets49.6 +/- 18.3bp
Average Position of motif in Background44.1 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.63
Offset:4
Orientation:forward strand
Alignment:CTCCCTGCCCACA
----CTGCCCGCA
 A G T C A C G T A T G C A G T C A T G C A C G T A C T G A G T C A T G C G T A C G T C A A G T C G T C A
A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CTCCCTGCCCACA
ACTTCCGGTN----
 A C G T A G T C A C G T A T G C A G T C A T G C A C G T A C T G A G T C A T G C G T A C G T C A A G T C G T C A
T C G A A G T C G C A T G C A T A T G C A G T C A C T G A T C G A G C T A G C T A C G T A C G T A C G T A C G T

ELK4/MA0076.2/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CTCCCTGCCCACA
CCACTTCCGGC-----
 A C G T A C G T A C G T A G T C A C G T A T G C A G T C A T G C A C G T A C T G A G T C A T G C G T A C G T C A A G T C G T C A
A T G C A T G C C T G A A G T C C G A T A C G T A G T C A G T C A C T G A T C G A G T C A C G T A C G T A C G T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:4
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CTCCCTGCCCACA
CACTTCCTGT-----
 A C G T A C G T A G T C A C G T A T G C A G T C A T G C A C G T A C T G A G T C A T G C G T A C G T C A A G T C G T C A
A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T A C G T A C G T A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CTCCCTGCCCACA--
TACGCCCCGCCACTCTG
 A C G T A C G T A G T C A C G T A T G C A G T C A T G C A C G T A C T G A G T C A T G C G T A C G T C A A G T C G T C A A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

E2F4/MA0470.1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTCCCTGCCCACA
NNTTCCCGCCC---
 A C G T A G T C A C G T A T G C A G T C A T G C A C G T A C T G A G T C A T G C G T A C G T C A A G T C G T C A
A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C A C G T A C G T A C G T

ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTCCCTGCCCACA
ACTTCCGGTT----
 A C G T A G T C A C G T A T G C A G T C A T G C A C G T A C T G A G T C A T G C G T A C G T C A A G T C G T C A
T C G A A G T C G C A T C G A T A G T C A G T C A C T G A T C G G A C T A G C T A C G T A C G T A C G T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CTCCCTGCCCACA
TTTCCCGCCMAV-
 A G T C A C G T A T G C A G T C A T G C A C G T A C T G A G T C A T G C G T A C G T C A A G T C G T C A
C G A T G A C T A C G T A T G C A T G C A G T C A C T G A T G C T A G C G T A C T G C A T G A C A C G T

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CTCCCTGCCCACA
CACTTCCTGT-----
 A C G T A C G T A G T C A C G T A T G C A G T C A T G C A C G T A C T G A G T C A T G C G T A C G T C A A G T C G T C A
A T G C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T A C G T A C G T A C G T A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CTCCCTGCCCACA
-GCCCCGCCCCC-
 A G T C A C G T A T G C A G T C A T G C A C G T A C T G A G T C A T G C G T A C G T C A A G T C G T C A
A C G T A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C A C G T