Information for 7-CCCTCTGTGA (Motif 7)

A G T C A T G C A G T C A C G T A T G C C A G T A T C G A C G T A C T G C G T A
Reverse Opposite:
C G A T G T A C G T C A A T G C G T C A A T C G G T C A A C T G T A C G C T A G
p-value:1e-10
log p-value:-2.351e+01
Information Content per bp:1.837
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif3.54%
Number of Background Sequences with motif56.0
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets46.4 +/- 25.5bp
Average Position of motif in Background47.8 +/- 22.2bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CCCTCTGTGA
CCTGCTGAGH
 A G T C A T G C A G T C A C G T A T G C C A G T A T C G A C G T A C T G C G T A
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

PB0207.1_Zic3_2/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CCCTCTGTGA--
NNTCCTGCTGTGNNN
 A C G T A C G T A C G T A G T C A T G C A G T C A C G T A T G C C A G T A T C G A C G T A C T G C G T A A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CCCTCTGTGA
ACCATCTGTT-
 A C G T A G T C A T G C A G T C A C G T A T G C C A G T A T C G A C G T A C T G C G T A
T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CCCTCTGTGA--
TNTCCTGCTGTGNNG
 A C G T A C G T A C G T A G T C A T G C A G T C A C G T A T G C C A G T A T C G A C G T A C T G C G T A A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CCCTCTGTGA
GGCCYCCTGCTGDGH
 A C G T A C G T A C G T A C G T A C G T A G T C A T G C A G T C A C G T A T G C C A G T A T C G A C G T A C T G C G T A
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CCCTCTGTGA
GCCATCTGTT-
 A C G T A G T C A T G C A G T C A C G T A T G C C A G T A T C G A C G T A C T G C G T A
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CCCTCTGTGA
-CCTTTGTT-
 A G T C A T G C A G T C A C G T A T G C C A G T A T C G A C G T A C T G C G T A
A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CCCTCTGTGA
---GCTGTG-
 A G T C A T G C A G T C A C G T A T G C C A G T A T C G A C G T A C T G C G T A
A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:9
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CCCTCTGTGA
GACCCCCCGCTGTG-
 A C G T A C G T A C G T A C G T A C G T A G T C A T G C A G T C A C G T A T G C C A G T A T C G A C G T A C T G C G T A
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CCCTCTGTGA--
TCNCCTGCTGNGNNN
 A C G T A C G T A C G T A G T C A T G C A G T C A C G T A T G C C A G T A T C G A C G T A C T G C G T A A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G