Information for 5-GAGAGGSCSGCGGAGA (Motif 11)

A T C G C G T A C T A G T C G A A T C G A C T G A T G C T G A C A T G C C A T G A G T C C T A G A C T G G T C A A C T G C T G A
Reverse Opposite:
A G C T G T A C A C G T A G T C A G T C C T A G G T A C A T C G A C T G A T C G A G T C A T G C A G C T A G T C A C G T A T G C
p-value:1e-8
log p-value:-1.861e+01
Information Content per bp:1.771
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets42.6 +/- 25.0bp
Average Position of motif in Background66.1 +/- 14.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EGR1/MA0162.2/Jaspar

Match Rank:1
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GAGAGGSCSGCGGAGA
GGCGGGGGCGGGGG---
 A C G T A T C G C G T A C T A G T C G A A T C G A C T G A T G C T G A C A T G C C A T G A G T C C T A G A C T G G T C A A C T G C T G A
A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:2
Score:0.51
Offset:4
Orientation:forward strand
Alignment:GAGAGGSCSGCGGAGA
----RGKGGGCGGAGC
 A T C G C G T A C T A G T C G A A T C G A C T G A T G C T G A C A T G C C A T G A G T C C T A G A C T G G T C A A C T G C T G A
A C G T A C G T A C G T A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C

PLAG1/MA0163.1/Jaspar

Match Rank:3
Score:0.51
Offset:2
Orientation:forward strand
Alignment:GAGAGGSCSGCGGAGA
--GGGGCCCAAGGGGG
 A T C G C G T A C T A G T C G A A T C G A C T G A T G C T G A C A T G C C A T G A G T C C T A G A C T G G T C A A C T G C T G A
A C G T A C G T A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G

GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:4
Score:0.49
Offset:1
Orientation:forward strand
Alignment:GAGAGGSCSGCGGAGA-----
-AGATSTNDNNDSAGATAASN
 A T C G C G T A C T A G T C G A A T C G A C T G A T G C T G A C A T G C C A T G A G T C C T A G A C T G G T C A A C T G C T G A A C G T A C G T A C G T A C G T A C G T
A C G T C G T A A C T G C G T A A C G T A T C G C A G T T A G C C G T A T C G A G T A C C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A A T C G G C T A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.49
Offset:-5
Orientation:reverse strand
Alignment:-----GAGAGGSCSGCGGAGA
GCCASCAGGGGGCGCYVNNG-
 A C G T A C G T A C G T A C G T A C G T A T C G C G T A C T A G T C G A A T C G A C T G A T G C T G A C A T G C C A T G A G T C C T A G A C T G G T C A A C T G C T G A
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G A C G T

PB0010.1_Egr1_1/Jaspar

Match Rank:6
Score:0.48
Offset:-3
Orientation:reverse strand
Alignment:---GAGAGGSCSGCGGAGA
ANTGCGGGGGCGGN-----
 A C G T A C G T A C G T A T C G C G T A C T A G T C G A A T C G A C T G A T G C T G A C A T G C C A T G A G T C C T A G A C T G G T C A A C T G C T G A
G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A A C G T A C G T A C G T A C G T A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.48
Offset:-6
Orientation:forward strand
Alignment:------GAGAGGSCSGCGGAGA
SMCAGTCWGAKGGAGGAGGC--
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G C G T A C T A G T C G A A T C G A C T G A T G C T G A C A T G C C A T G A G T C C T A G A C T G G T C A A C T G C T G A
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:8
Score:0.47
Offset:-1
Orientation:forward strand
Alignment:-GAGAGGSCSGCGGAGA
CAAGATGGCGGC-----
 A C G T A T C G C G T A C T A G T C G A A T C G A C T G A T G C T G A C A T G C C A T G A G T C C T A G A C T G G T C A A C T G C T G A
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T A C G T A C G T A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:9
Score:0.47
Offset:-3
Orientation:reverse strand
Alignment:---GAGAGGSCSGCGGAGA
NNNAAGGGGGCGGGNNN--
 A C G T A C G T A C G T A T C G C G T A C T A G T C G A A T C G A C T G A T G C T G A C A T G C C A T G A G T C C T A G A C T G G T C A A C T G C T G A
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:10
Score:0.47
Offset:10
Orientation:forward strand
Alignment:GAGAGGSCSGCGGAGA
----------TGGGGA
 A T C G C G T A C T A G T C G A A T C G A C T G A T G C T G A C A T G C C A T G A G T C C T A G A C T G G T C A A C T G C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A