Information for 8-GAAGCCTCGCGCA (Motif 9)

A C T G C G T A C G T A A C T G A G T C A G T C C G A T A T G C C T A G G T A C A C T G G T A C C G T A
Reverse Opposite:
A C G T A C T G A G T C A C T G A G T C A T C G C G T A A C T G A C T G G T A C A C G T A C G T A G T C
p-value:1e-10
log p-value:-2.325e+01
Information Content per bp:1.932
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif7.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets68.1 +/- 11.5bp
Average Position of motif in Background56.7 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A/MA0003.3/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GAAGCCTCGCGCA
--CGCCTCAGGCA
 A C T G C G T A C G T A A C T G A G T C A G T C C G A T A T G C C T A G G T A C A C T G G T A C C G T A
A C G T A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GAAGCCTCGCGCA
--AGCCTCAGGCA
 A C T G C G T A C G T A A C T G A G T C A G T C C G A T A T G C C T A G G T A C A C T G G T A C C G T A
A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GAAGCCTCGCGCA
NGAAGC--------
 A C G T A C T G C G T A C G T A A C T G A G T C A G T C C G A T A T G C C T A G G T A C A C T G G T A C C G T A
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GAAGCCTCGCGCA
--AGCCTCAGGCA
 A C T G C G T A C G T A A C T G A G T C A G T C C G A T A T G C C T A G G T A C A C T G G T A C C G T A
A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A

SP4/MA0685.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GAAGCCTCGCGCA----
TAAGCCACGCCCCCTTT
 A C T G C G T A C G T A A C T G A G T C A G T C C G A T A T G C C T A G G T A C A C T G G T A C C G T A A C G T A C G T A C G T A C G T
A G C T G C T A C T G A C T A G G T A C A G T C T G C A G T A C A C T G T A G C T G A C A G T C G T A C G A T C G C A T G A C T G A C T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GAAGCCTCGCGCA--
ATTGCCTCAGGCAAT
 A C T G C G T A C G T A A C T G A G T C A G T C C G A T A T G C C T A G G T A C A C T G G T A C C G T A A C G T A C G T
C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T

HSF4/MA0771.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GAAGCCTCGCGCA
GAANNTTCTAGAA
 A C T G C G T A C G T A A C T G A G T C A G T C C G A T A T G C C T A G G T A C A C T G G T A C C G T A
T C A G G C T A G C T A A G T C T C A G C G A T C G A T T A G C A G C T T C G A A T C G G T C A G C T A

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GAAGCCTCGCGCA
-AGGCCTNG----
 A C T G C G T A C G T A A C T G A G T C A G T C C G A T A T G C C T A G G T A C A C T G G T A C C G T A
A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GAAGCCTCGCGCA--
NTNGCCTCAGGCNNN
 A C T G C G T A C G T A A C T G A G T C A G T C C G A T A T G C C T A G G T A C A C T G G T A C C G T A A C G T A C G T
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T

Tcfl5/MA0632.1/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GAAGCCTCGCGCA
---GGCACGTGCC
 A C T G C G T A C G T A A C T G A G T C A G T C C G A T A T G C C T A G G T A C A C T G G T A C C G T A
A C G T A C G T A C G T C T A G A C T G G T A C C T G A A G T C T C A G G A C T C A T G T G A C G A T C