Information for 8-CCCCTTAGAGCAG (Motif 7)

A T G C A G T C A G T C A G T C A C G T C G A T C G T A C T A G C G T A C T A G A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A G T C A C G T A G T C A C G T C G T A G T C A A C T G A C T G A C T G A T C G
p-value:1e-10
log p-value:-2.526e+01
Information Content per bp:1.929
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.2 +/- 31.6bp
Average Position of motif in Background93.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CCCCTTAGAGCAG
TGCCCTGAGGGCA-
 A C G T A T G C A G T C A G T C A G T C A C G T C G A T C G T A C T A G C G T A C T A G A G T C C G T A A C T G
G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CCCCTTAGAGCAG
TGCCCNNAGGGCA-
 A C G T A T G C A G T C A G T C A G T C A C G T C G A T C G T A C T A G C G T A C T A G A G T C C G T A A C T G
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CCCCTTAGAGCAG
TGCCCTGAGGGCA-
 A C G T A T G C A G T C A G T C A G T C A C G T C G A T C G T A C T A G C G T A C T A G A G T C C G T A A C T G
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CCCCTTAGAGCAG
-GCCTCAGGGCAT
 A T G C A G T C A G T C A G T C A C G T C G A T C G T A C T A G C G T A C T A G A G T C C G T A A C T G
A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

INSM1/MA0155.1/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CCCCTTAGAGCAG
CGCCCCCTGACA----
 A C G T A C G T A C G T A T G C A G T C A G T C A G T C A C G T C G A T C G T A C T A G C G T A C T A G A G T C C G T A A C T G
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T A C G T A C G T A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CCCCTTAGAGCAG
BCMATTAG-----
 A T G C A G T C A G T C A G T C A C G T C G A T C G T A C T A G C G T A C T A G A G T C C G T A A C T G
A C T G A G T C G T C A G T C A A C G T A G C T C G T A T C A G A C G T A C G T A C G T A C G T A C G T

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CCCCTTAGAGCAG
TTGCCCTAGGGCAT
 A C G T A T G C A G T C A G T C A G T C A C G T C G A T C G T A C T A G C G T A C T A G A G T C C G T A A C T G
C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T

Nkx3-1/MA0124.2/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CCCCTTAGAGCAG
ACCACTTAA-----
 A C G T A T G C A G T C A G T C A G T C A C G T C G A T C G T A C T A G C G T A C T A G A G T C C G T A A C T G
T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T A C G T A C G T A C G T A C G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CCCCTTAGAGCAG---
TCNCTTTACAGCGNNNT
 A C G T A T G C A G T C A G T C A G T C A C G T C G A T C G T A C T A G C G T A C T A G A G T C C G T A A C T G A C G T A C G T A C G T
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

NKX3-2/MA0122.2/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CCCCTTAGAGCAG
ACCACTTAA-----
 A C G T A T G C A G T C A G T C A G T C A C G T C G A T C G T A C T A G C G T A C T A G A G T C C G T A A C T G
T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T A C G T A C G T A C G T A C G T