Information for 11-GGGTTAGTAGTGT (Motif 11)

A C T G A C T G A C T G A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A A G T C A C G T C G T A A G T C A C G T C G T A C G T A A G T C A G T C A G T C
p-value:1e-8
log p-value:-1.956e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.5 +/- 24.0bp
Average Position of motif in Background78.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GGGTTAGTAGTGT
GGGAATTGTAGT--
 A C G T A C T G A C T G A C T G A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C G T A C T G A C G T
C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:2
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GGGTTAGTAGTGT
GGATTAGC-----
 A C T G A C T G A C T G A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C G T A C T G A C G T
T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T A C G T A C G T A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:3
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GGGTTAGTAGTGT
GGGATTANN-----
 A C G T A C T G A C T G A C T G A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C G T A C T G A C G T
C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G A C G T A C G T A C G T A C G T A C G T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:4
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GGGTTAGTAGTGT-----
----NNGTANTGTTTTNC
 A C T G A C T G A C T G A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GGGTTAGTAGTGT
CAGGTAAGTAT---
 A C G T A C T G A C T G A C T G A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C G T A C T G A C G T
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T A C G T A C G T A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:6
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GGGTTAGTAGTGT--
NNNTTAGGTAGCNTNT
 A C G T A C T G A C T G A C T G A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C G T A C T G A C G T A C G T A C G T
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GGGTTAGTAGTGT
NGGGATTA-------
 A C G T A C G T A C T G A C T G A C T G A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C G T A C T G A C G T
T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Crx/MA0467.1/Jaspar

Match Rank:8
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----GGGTTAGTAGTGT
AAGAGGATTAG------
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C G T A C T G A C G T
T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

Dmbx1/MA0883.1/Jaspar

Match Rank:9
Score:0.52
Offset:-6
Orientation:forward strand
Alignment:------GGGTTAGTAGTGT
TGAACCGGATTAATGAA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C G T A C T G A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A A C G T A C G T

PH0025.1_Dmbx1/Jaspar

Match Rank:10
Score:0.52
Offset:-6
Orientation:forward strand
Alignment:------GGGTTAGTAGTGT
TGAACCGGATTAATGAA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C G T A C T G A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A A C G T A C G T