Information for 1-GTCCCTGGASAGGAGA (Motif 3)

A T C G A C G T A T G C G T A C G A T C A C G T A C T G A T C G T C G A T A C G C T G A A C T G A C T G C T G A A C T G C T G A
Reverse Opposite:
A G C T T A G C A G C T A G T C A G T C A G C T A T G C A C G T A T G C A G T C G T C A C A T G A C T G A T C G C G T A A T G C
p-value:1e-13
log p-value:-3.044e+01
Information Content per bp:1.773
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.2 +/- 23.1bp
Average Position of motif in Background32.2 +/- 15.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:1
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GTCCCTGGASAGGAGA
NGTCCCNNGGGA-----
 A C G T A T C G A C G T A T G C G T A C G A T C A C G T A C T G A T C G T C G A T A C G C T G A A C T G A C T G C T G A A C T G C T G A
C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A A C G T A C G T A C G T A C G T A C G T

Bcl6/MA0463.1/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GTCCCTGGASAGGAGA
TTTCCTAGAAAGCA--
 A T C G A C G T A T G C G T A C G A T C A C G T A C T G A T C G T C G A T A C G C T G A A C T G A C T G C T G A A C T G C T G A
C A G T C G A T A G C T G T A C A G T C A C G T T C G A C T A G C T G A T C G A C T G A C A T G G T A C G C T A A C G T A C G T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GTCCCTGGASAGGAGA
TTTCCTGGAAAGNNN-
 A T C G A C G T A T G C G T A C G A T C A C G T A C T G A T C G T C G A T A C G C T G A A C T G A C T G C T G A A C T G C T G A
G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GTCCCTGGASAGGAGA
CTGTTCCTGG--------
 A C G T A C G T A T C G A C G T A T G C G T A C G A T C A C G T A C T G A T C G T C G A T A C G C T G A A C T G A C T G C T G A A C T G C T G A
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RARA::RXRA/MA0159.1/Jaspar

Match Rank:5
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-GTCCCTGGASAGGAGA
AGGTCACGGAGAGGTCA
 A C G T A T C G A C G T A T G C G T A C G A T C A C G T A C T G A T C G T C G A T A C G C T G A A C T G A C T G C T G A A C T G C T G A
C T G A A C T G C A T G A C G T A T G C C T G A A G C T T A C G T C A G C T G A T A C G T C G A A C T G A C T G C A G T A T G C C G T A

EBF1/MA0154.3/Jaspar

Match Rank:6
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GTCCCTGGASAGGAGA
ANTCCCTNGGGAAT---
 A C G T A T C G A C G T A T G C G T A C G A T C A C G T A C T G A T C G T C G A T A C G C T G A A C T G A C T G C T G A A C T G C T G A
C T G A C A G T G A C T G T A C A G T C A G T C G C A T C G A T C T A G T C A G T A C G C T G A T G C A G A C T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.50
Offset:1
Orientation:forward strand
Alignment:GTCCCTGGASAGGAGA
-WDNCTGGGCA-----
 A T C G A C G T A T G C G T A C G A T C A C G T A C T G A T C G T C G A T A C G C T G A A C T G A C T G C T G A A C T G C T G A
A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:8
Score:0.50
Offset:-6
Orientation:forward strand
Alignment:------GTCCCTGGASAGGAGA
GGAGCTGTCCATGGTGCTGA--
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A T G C G T A C G A T C A C G T A C T G A T C G T C G A T A C G C T G A A C T G A C T G C T G A A C T G C T G A
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A A C G T A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.50
Offset:4
Orientation:forward strand
Alignment:GTCCCTGGASAGGAGA
----TGGGGAAGGGCM
 A T C G A C G T A T G C G T A C G A T C A C G T A C T G A T C G T C G A T A C G C T G A A C T G A C T G C T G A A C T G C T G A
A C G T A C G T A C G T A C G T G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:10
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GTCCCTGGASAGGAGA
TGACCTTGAN-------
 A C G T A T C G A C G T A T G C G T A C G A T C A C G T A C T G A T C G T C G A T A C G C T G A A C T G A C T G C T G A A C T G C T G A
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T