Information for 8-GCAGGTGCAC (Motif 17)

A C T G A T G C G T C A A C T G C A T G C A G T A T C G T G A C C G T A A T G C
Reverse Opposite:
T A C G A C G T A C T G A T G C G T C A G T A C A G T C A C G T A T C G G T A C
p-value:1e-9
log p-value:-2.196e+01
Information Content per bp:1.824
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif2.95%
Number of Background Sequences with motif214.1
Percentage of Background Sequences with motif0.66%
Average Position of motif in Targets64.1 +/- 24.4bp
Average Position of motif in Background49.8 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.86
Offset:-2
Orientation:reverse strand
Alignment:--GCAGGTGCAC
SDGCAGGTGCNS
 A C G T A C G T A C T G A T G C G T C A A C T G C A T G C A G T A T C G T G A C C G T A A T G C
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

TCF4/MA0830.1/Jaspar

Match Rank:2
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-GCAGGTGCAC
NNCAGGTGCG-
 A C G T A C T G A T G C G T C A A C T G C A T G C A G T A T C G T G A C C G T A A T G C
G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T

ID4/MA0824.1/Jaspar

Match Rank:3
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-GCAGGTGCAC
GACAGGTGTN-
 A C G T A C T G A T G C G T C A A C T G C A T G C A G T A T C G T G A C C G T A A T G C
C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A A C G T

TCF3/MA0522.2/Jaspar

Match Rank:4
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-GCAGGTGCAC
NNCAGGTGTN-
 A C G T A C T G A T G C G T C A A C T G C A T G C A G T A T C G T G A C C G T A A T G C
G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-GCAGGTGCAC
NNCAGGTGNN-
 A C G T A C T G A T G C G T C A A C T G C A T G C A G T A T C G T G A C C G T A A T G C
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:6
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-GCAGGTGCAC
AACAGGTGT--
 A C G T A C T G A T G C G T C A A C T G C A T G C A G T A T C G T G A C C G T A A T G C
C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:7
Score:0.78
Offset:-4
Orientation:forward strand
Alignment:----GCAGGTGCAC---
ATCCACAGGTGCGAAAA
 A C G T A C G T A C G T A C G T A C T G A T G C G T C A A C T G C A T G C A G T A T C G T G A C C G T A A T G C A C G T A C G T A C G T
T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.74
Offset:0
Orientation:forward strand
Alignment:GCAGGTGCAC
VCAGGTRDRY
 A C T G A T G C G T C A A C T G C A T G C A G T A T C G T G A C C G T A A T G C
T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C

Myod1/MA0499.1/Jaspar

Match Rank:9
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----GCAGGTGCAC
NGNGACAGCTGCN-
 A C G T A C G T A C G T A C G T A C T G A T G C G T C A A C T G C A T G C A G T A T C G T G A C C G T A A T G C
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:10
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GCAGGTGCAC
CGCAGCTGCG-
 A C G T A C T G A T G C G T C A A C T G C A T G C A G T A T C G T G A C C G T A A T G C
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T