Information for 17-CTGGGGTGTCTCT (Motif 24)

A T G C G A C T A C T G A T C G C A T G C T A G A C G T A T C G A G C T A G T C C G A T A T G C C A G T
Reverse Opposite:
G T C A A T C G G C T A T A C G T C G A T A G C G T C A G A T C G A T C A T G C G T A C C G T A A T C G
p-value:1e-6
log p-value:-1.389e+01
Information Content per bp:1.741
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.36%
Number of Background Sequences with motif108.0
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets56.4 +/- 25.8bp
Average Position of motif in Background50.3 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CTGGGGTGTCTCT
GYCTGGYYTNTGTCA
 A C G T A C G T A T G C G A C T A C T G A T C G C A T G C T A G A C G T A T C G A G C T A G T C C G A T A T G C C A G T
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CTGGGGTGTCTCT
-GGGGGTGTGTCC
 A T G C G A C T A C T G A T C G C A T G C T A G A C G T A T C G A G C T A G T C C G A T A T G C C A G T
A C G T T C A G C A T G C A T G A C T G A C T G A G C T A C T G A C G T A C T G C A G T A T G C A G T C

PB0025.1_Glis2_1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CTGGGGTGTCTCT-
NTNTGGGGGGTCNNNA
 A C G T A C G T A T G C G A C T A C T G A T C G C A T G C T A G A C G T A T C G A G C T A G T C C G A T A T G C C A G T A C G T
G T A C G A C T T C A G A C G T C T A G C T A G C A T G C A T G A C T G A C T G A C G T T G A C A T C G C G T A C G A T C T G A

GLIS1/MA0735.1/Jaspar

Match Rank:4
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----CTGGGGTGTCTCT
GCTTCGTGGGGGGTCT--
 A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G A T C G C A T G C T A G A C G T A T C G A G C T A G T C C G A T A T G C C A G T
T A C G G T A C C G A T G C A T G T A C A C T G G A C T A C T G C T A G A T C G A T C G C A T G A T C G G C A T T G A C C A G T A C G T A C G T

PH0162.1_Six2/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CTGGGGTGTCTCT---
AATGGGGTATCACGTTT
 A C G T A T G C G A C T A C T G A T C G C A T G C T A G A C G T A T C G A G C T A G T C C G A T A T G C C A G T A C G T A C G T A C G T
C T G A G C T A C A G T T C A G C T A G A C T G C T A G A C G T C T G A A C G T G A T C C T G A G A T C C A G T G C A T G A C T C A G T

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CTGGGGTGTCTCT
GTCWGCTGTYYCTCT
 A C G T A C G T A T G C G A C T A C T G A T C G C A T G C T A G A C G T A T C G A G C T A G T C C G A T A T G C C A G T
C T A G A C G T A G T C C G T A A C T G A G T C G C A T A C T G G C A T A G T C G A C T G A T C G C A T A G T C A G C T

SREBF2/MA0596.1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CTGGGGTGTCTCT
ATGGGGTGAT---
 A T G C G A C T A C T G A T C G C A T G C T A G A C G T A T C G A G C T A G T C C G A T A T G C C A G T
T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T A C G T A C G T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CTGGGGTGTCTCT
ATGGGGTGAT---
 A T G C G A C T A C T G A T C G C A T G C T A G A C G T A T C G A G C T A G T C C G A T A T G C C A G T
T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T A C G T A C G T A C G T

GLIS3/MA0737.1/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CTGGGGTGTCTCT
CTTCGTGGGGGGTC---
 A C G T A C G T A C G T A C G T A T G C G A C T A C T G A T C G C A T G C T A G A C G T A T C G A G C T A G T C C G A T A T G C C A G T
T A G C C A G T G C A T G A T C T C A G G A C T C T A G A C T G C T A G C T A G A C T G T A C G A G C T T G A C A C G T A C G T A C G T

SREBF1/MA0595.1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTGGGGTGTCTCT
GTGGGGTGAT---
 A T G C G A C T A C T G A T C G C A T G C T A G A C G T A T C G A G C T A G T C C G A T A T G C C A G T
T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T A C G T A C G T A C G T