Information for 9-GAGAGAGCGA (Motif 21)

C T A G C G T A A C T G C G T A A T C G C T G A A C T G G T A C T C A G C G T A
Reverse Opposite:
C G A T A G T C C A T G A G T C A G C T A T G C C G A T A G T C G C A T A G T C
p-value:1e-7
log p-value:-1.679e+01
Information Content per bp:1.848
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.38%
Number of Background Sequences with motif271.4
Percentage of Background Sequences with motif0.56%
Average Position of motif in Targets42.1 +/- 24.9bp
Average Position of motif in Background51.6 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0140.1_Irf6_2/Jaspar

Match Rank:1
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------GAGAGAGCGA
NNNACCGAGAGTNNN-
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A A C T G C G T A A T C G C T G A A C T G G T A C T C A G C G T A
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GAGAGAGCGA
----CAGCC-
 C T A G C G T A A C T G C G T A A T C G C T G A A C T G G T A C T C A G C G T A
A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:3
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----GAGAGAGCGA
AGAAAGTGAAAGTGA
 A C G T A C G T A C G T A C G T A C G T C T A G C G T A A C T G C G T A A T C G C T G A A C T G G T A C T C A G C G T A
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GAGAGAGCGA
TGCGTGGGYG-
 A C G T C T A G C G T A A C T G C G T A A T C G C T G A A C T G G T A C T C A G C G T A
C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GAGAGAGCGA--
--GAGSCCGAGC
 C T A G C G T A A C T G C G T A A T C G C T G A A C T G G T A C T C A G C G T A A C G T A C G T
A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

IRF2/MA0051.1/Jaspar

Match Rank:6
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GAGAGAGCGA---------
-GGAAAGCGAAACCAAAAC
 C T A G C G T A A C T G C G T A A T C G C T G A A C T G G T A C T C A G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C

PB0138.1_Irf4_2/Jaspar

Match Rank:7
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------GAGAGAGCGA
GNNACCGAGAATNNN-
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A A C T G C G T A A T C G C T G A A C T G G T A C T C A G C G T A
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----GAGAGAGCGA
GAAAGTGAAAGT--
 A C G T A C G T A C G T A C G T C T A G C G T A A C T G C G T A A T C G C T G A A C T G G T A C T C A G C G T A
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GAGAGAGCGA----
NNNAAGGGGGCGGGNNN
 A C G T A C G T A C G T C T A G C G T A A C T G C G T A A T C G C T G A A C T G G T A C T C A G C G T A A C G T A C G T A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

PB0010.1_Egr1_1/Jaspar

Match Rank:10
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GAGAGAGCGA-
ANTGCGGGGGCGGN
 A C G T A C G T A C G T C T A G C G T A A C T G C G T A A T C G C T G A A C T G G T A C T C A G C G T A A C G T
G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A