Information for 4-CTCCCCCAMCTGGGCT (Motif 11)

A G T C A C G T A G T C G T A C G A T C G T A C A G T C T C G A T G C A T G A C A G C T C A T G C T A G A T C G T A G C A G C T
Reverse Opposite:
C T G A A T C G A T G C A G T C G T A C C T G A A C T G A C G T A G C T A C T G A C T G C T A G A C T G C T A G G T C A C T A G
p-value:1e-10
log p-value:-2.529e+01
Information Content per bp:1.688
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.20%
Number of Background Sequences with motif22.2
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets57.5 +/- 26.8bp
Average Position of motif in Background47.9 +/- 24.3bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CTCCCCCAMCTGGGCT
--CCCCCTGCTGTG--
 A G T C A C G T A G T C G T A C G A T C G T A C A G T C T C G A T G C A T G A C A G C T C A T G C T A G A T C G T A G C A G C T
A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:2
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CTCCCCCAMCTGGGCT
CCCCTCCCCCAC-------
 A C G T A C G T A C G T A G T C A C G T A G T C G T A C G A T C G T A C A G T C T C G A T G C A T G A C A G C T C A T G C T A G A T C G T A G C A G C T
T A G C G T A C A G T C G T A C C G A T A G T C A G T C A G T C A G T C A G T C C G T A G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------CTCCCCCAMCTGGGCT
CNNBRGCGCCCCCTGSTGGC--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C G T A C G A T C G T A C A G T C T C G A T G C A T G A C A G C T C A T G C T A G A T C G T A G C A G C T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTCCCCCAMCTGGGCT
-TCCCCA---------
 A G T C A C G T A G T C G T A C G A T C G T A C A G T C T C G A T G C A T G A C A G C T C A T G C T A G A T C G T A G C A G C T
A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CTCCCCCAMCTGGGCT
GGCCYCCTGCTGDGH-
 A G T C A C G T A G T C G T A C G A T C G T A C A G T C T C G A T G C A T G A C A G C T C A T G C T A G A T C G T A G C A G C T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTCCCCCAMCTGGGCT
GCTCCGCCCMCY-----
 A C G T A G T C A C G T A G T C G T A C G A T C G T A C A G T C T C G A T G C A T G A C A G C T C A T G C T A G A T C G T A G C A G C T
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T A C G T A C G T A C G T A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CTCCCCCAMCTGGGCT--
GCCTCCTCCMTCWGACTGKS
 A C G T A C G T A G T C A C G T A G T C G T A C G A T C G T A C A G T C T C G A T G C A T G A C A G C T C A T G C T A G A T C G T A G C A G C T A C G T A C G T
T A C G G A T C G A T C G A C T A G T C A G T C G C A T A G T C A G T C G T A C A G C T A G T C G C T A T C A G C T G A A G T C G A C T T A C G A C T G T A G C

PB0100.1_Zfp740_1/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CTCCCCCAMCTGGGCT
CCCCCCCCCCCACTTG----
 A C G T A C G T A C G T A C G T A G T C A C G T A G T C G T A C G A T C G T A C A G T C T C G A T G C A T G A C A G C T C A T G C T A G A T C G T A G C A G C T
A G T C T A G C A G T C T A G C T G A C G T A C G T A C G A T C G A T C G T A C G T A C G T C A G T A C G C A T G A C T A T C G A C G T A C G T A C G T A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CTCCCCCAMCTGGGCT
GACCCCCCGCTGCGC-
 A G T C A C G T A G T C G T A C G A T C G T A C A G T C T C G A T G C A T G A C A G C T C A T G C T A G A T C G T A G C A G C T
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C A C G T

CTCF/MA0139.1/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CTCCCCCAMCTGGGCT
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A G T C A C G T A G T C G T A C G A T C G T A C A G T C T C G A T G C A T G A C A G C T C A T G C T A G A T C G T A G C A G C T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A