Information for 24-TTTGTCAAGGTCGTTA (Motif 42)

A G C T A G C T A G C T A T C G A C G T A G T C C G T A G T C A A C T G A C T G A C G T A G T C A C T G A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A A G T C A C T G G T C A A G T C T G A C A C G T A C G T A C T G C G T A A T G C C T G A C T G A C T G A
p-value:1e-6
log p-value:-1.430e+01
Information Content per bp:1.896
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.0 +/- 25.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Esrra/MA0592.2/Jaspar

Match Rank:1
Score:0.66
Offset:3
Orientation:forward strand
Alignment:TTTGTCAAGGTCGTTA
---TTCAAGGTCAT--
 A G C T A G C T A G C T A T C G A C G T A G T C C G T A G T C A A C T G A C T G A C G T A G T C A C T G A C G T A C G T C G T A
A C G T A C G T A C G T A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:2
Score:0.65
Offset:4
Orientation:forward strand
Alignment:TTTGTCAAGGTCGTTA
----TCAAGGTCATA-
 A G C T A G C T A G C T A T C G A C G T A G T C C G T A G T C A A C T G A C T G A C G T A G T C A C T G A C G T A C G T C G T A
A C G T A C G T A C G T A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TTTGTCAAGGTCGTTA--
-TATTCAAGGTCATGCGA
 A G C T A G C T A G C T A T C G A C G T A G T C C G T A G T C A A C T G A C T G A C G T A G T C A C T G A C G T A C G T C G T A A C G T A C G T
A C G T C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TTTGTCAAGGTCGTTA
---NTCAAGGTCA---
 A G C T A G C T A G C T A T C G A C G T A G T C C G T A G T C A A C T G A C T G A C G T A G T C A C T G A C G T A C G T C G T A
A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:5
Score:0.62
Offset:4
Orientation:forward strand
Alignment:TTTGTCAAGGTCGTTA
----TCAAGGTCAT--
 A G C T A G C T A G C T A T C G A C G T A G T C C G T A G T C A A C T G A C T G A C G T A G T C A C T G A C G T A C G T C G T A
A C G T A C G T A C G T A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TTTGTCAAGGTCGTTA
---BTCAAGGTCA---
 A G C T A G C T A G C T A T C G A C G T A G T C C G T A G T C A A C T G A C T G A C G T A G T C A C T G A C G T A C G T C G T A
A C G T A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T

PB0131.1_Gmeb1_2/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TTTGTCAAGGTCGTTA-
-TGGGCGACGTCGTTAA
 A G C T A G C T A G C T A T C G A C G T A G T C C G T A G T C A A C T G A C T G A C G T A G T C A C T G A C G T A C G T C G T A A C G T
A C G T C A G T C A T G T C A G A C T G G T A C T C A G G C T A T A G C A C T G C A G T A G T C C A T G G A C T A G C T G T C A G C T A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TTTGTCAAGGTCGTTA
----TCAAGGTCAN--
 A G C T A G C T A G C T A T C G A C G T A G T C C G T A G T C A A C T G A C T G A C G T A G T C A C T G A C G T A C G T C G T A
A C G T A C G T A C G T A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T

PH0066.1_Hoxc11/Jaspar

Match Rank:9
Score:0.57
Offset:5
Orientation:forward strand
Alignment:TTTGTCAAGGTCGTTA-----
-----TAAAGTCGTAAAATAG
 A G C T A G C T A G C T A T C G A C G T A G T C C G T A G T C A A C T G A C T G A C G T A G T C A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C T G A C G T A C T G A T C A G A G C T G A T C C T A G A C G T C G T A C G T A C G T A G C T A G A C T C T G A C A T G

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:10
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TTTGTCAAGGTCGTTA
NNAATTAGTCACGGT-----
 A C G T A C G T A C G T A C G T A G C T A G C T A G C T A T C G A C G T A G T C C G T A G T C A A C T G A C T G A C G T A G T C A C T G A C G T A C G T C G T A
A G C T G A T C T C G A C G T A A C G T A G C T C G T A A C T G G A C T G A T C G T C A G A T C C T A G A T C G G C A T A C G T A C G T A C G T A C G T A C G T