Information for 22-SKSCYAGCTGCAG (Motif 39)

A T C G A C T G A T G C A G T C A G T C C G T A A T C G A T G C A C G T A C T G A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A G T C C G T A A T C G A T G C A C G T C T A G A C T G A T C G G T A C A T G C
p-value:1e-7
log p-value:-1.715e+01
Information Content per bp:1.869
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif30.3
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets62.5 +/- 18.5bp
Average Position of motif in Background49.7 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.69
Offset:3
Orientation:forward strand
Alignment:SKSCYAGCTGCAG
---NCAGCTGCTG
 A T C G A C T G A T G C A G T C A G T C C G T A A T C G A T G C A C G T A C T G A G T C C G T A A C T G
A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:2
Score:0.68
Offset:1
Orientation:forward strand
Alignment:SKSCYAGCTGCAG
-NNACAGCTGC--
 A T C G A C T G A T G C A G T C A G T C C G T A A T C G A T G C A C G T A C T G A G T C C G T A A C T G
A C G T C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:SKSCYAGCTGCAG
NNVVCAGCTGBN-
 A T C G A C T G A T G C A G T C A G T C C G T A A T C G A T G C A C G T A C T G A G T C C G T A A C T G
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T

Myog/MA0500.1/Jaspar

Match Rank:4
Score:0.66
Offset:2
Orientation:forward strand
Alignment:SKSCYAGCTGCAG
--GACAGCTGCAG
 A T C G A C T G A T G C A G T C A G T C C G T A A T C G A T G C A C G T A C T G A G T C C G T A A C T G
A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

Tcf12/MA0521.1/Jaspar

Match Rank:5
Score:0.65
Offset:2
Orientation:forward strand
Alignment:SKSCYAGCTGCAG
--AACAGCTGCAG
 A T C G A C T G A T G C A G T C A G T C C G T A A T C G A T G C A C G T A C T G A G T C C G T A A C T G
A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:6
Score:0.64
Offset:2
Orientation:forward strand
Alignment:SKSCYAGCTGCAG-
--AGCAGCTGCTNN
 A T C G A C T G A T G C A G T C A G T C C G T A A T C G A T G C A C G T A C T G A G T C C G T A A C T G A C G T
A C G T A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

NHLH1/MA0048.2/Jaspar

Match Rank:7
Score:0.64
Offset:2
Orientation:forward strand
Alignment:SKSCYAGCTGCAG
--CGCAGCTGCG-
 A T C G A C T G A T G C A G T C A G T C C G T A A T C G A T G C A C G T A C T G A G T C C G T A A C T G
A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T

Myod1/MA0499.1/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-SKSCYAGCTGCAG
NGNGACAGCTGCN-
 A C G T A T C G A C T G A T G C A G T C A G T C C G T A A T C G A T G C A C G T A C T G A G T C C G T A A C T G
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:9
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:SKSCYAGCTGCAG
-NNVCAGCTGB--
 A T C G A C T G A T G C A G T C A G T C C G T A A T C G A T G C A C G T A C T G A G T C C G T A A C T G
A C G T C A T G T C A G T G A C G T A C G T C A T A C G T A G C G C A T T A C G A C T G A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:SKSCYAGCTGCAG
----CAGCTGNT-
 A T C G A C T G A T G C A G T C A G T C C G T A A T C G A T G C A C G T A C T G A G T C C G T A A C T G
A C G T A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T