Information for 17-TGGCCCBGCGCTA (Motif 30)

A C G T A C T G A T C G A G T C A G T C A G T C A C G T A C T G G T A C A C T G A G T C A C G T G T C A
Reverse Opposite:
A C G T C G T A A C T G A G T C A C T G A G T C T C G A A C T G A C T G A C T G A T G C G T A C C G T A
p-value:1e-9
log p-value:-2.091e+01
Information Content per bp:1.845
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif6.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.5 +/- 24.2bp
Average Position of motif in Background72.1 +/- 16.8bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0157.1_Rara_2/Jaspar

Match Rank:1
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TGGCCCBGCGCTA
NNCNTGACCCCGCTCT-
 A C G T A C G T A C G T A C G T A C G T A C T G A T C G A G T C A G T C A G T C A C G T A C T G G T A C A C T G A G T C A C G T G T C A
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TGGCCCBGCGCTA
NNNNTGACCCGGCGCG-
 A C G T A C G T A C G T A C G T A C G T A C T G A T C G A G T C A G T C A G T C A C G T A C T G G T A C A C T G A G T C A C G T G T C A
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGGCCCBGCGCTA
TGACCTTGACCT-
 A C G T A C T G A T C G A G T C A G T C A G T C A C G T A C T G G T A C A C T G A G T C A C G T G T C A
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TGGCCCBGCGCTA-
TGGCACCATGCCAA
 A C G T A C T G A T C G A G T C A G T C A G T C A C G T A C T G G T A C A C T G A G T C A C G T G T C A A C G T
A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TGGCCCBGCGCTA-
NTNGCCTCAGGCNNN
 A C G T A C G T A C T G A T C G A G T C A G T C A G T C A C G T A C T G G T A C A C T G A G T C A C G T G T C A A C G T
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T

Nr5a2/MA0505.1/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TGGCCCBGCGCTA
GCTGACCTTGAACTN
 A C G T A C G T A C G T A C T G A T C G A G T C A G T C A G T C A C G T A C T G G T A C A C T G A G T C A C G T G T C A
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TGGCCCBGCGCTA
CTGCGCATGCGC--
 A C G T A C G T A C T G A T C G A G T C A G T C A G T C A C G T A C T G G T A C A C T G A G T C A C G T G T C A
A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C A C G T A C G T

POL011.1_XCPE1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TGGCCCBGCGCTA
-GGTCCCGCCC--
 A C G T A C T G A T C G A G T C A G T C A G T C A C G T A C T G G T A C A C T G A G T C A C G T G T C A
A C G T A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGGCCCBGCGCTA-
NNGCNCTGCGCGGC
 A C G T A C T G A T C G A G T C A G T C A G T C A C G T A C T G G T A C A C T G A G T C A C G T G T C A A C G T
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TGGCCCBGCGCTA
WTGSCCTSAGGS--
 A C G T A C G T A C T G A T C G A G T C A G T C A G T C A C G T A C T G G T A C A C T G A G T C A C G T G T C A
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T