Information for 4-CCWGSCRWTM (Motif 14)

A G T C G T A C C G A T A T C G A T G C G A T C T C A G C G T A A G C T G T C A
Reverse Opposite:
A C G T T C G A C G A T A G T C C T A G T A C G T A G C C G T A A C T G C T A G
p-value:1e-11
log p-value:-2.590e+01
Information Content per bp:1.611
Number of Target Sequences with motif81.0
Percentage of Target Sequences with motif10.66%
Number of Background Sequences with motif2257.0
Percentage of Background Sequences with motif4.62%
Average Position of motif in Targets51.9 +/- 27.6bp
Average Position of motif in Background50.4 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CCWGSCRWTM
CCAGCTGTTN
 A G T C G T A C C G A T A T C G A T G C G A T C T C A G C G T A A G C T G T C A
T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CCWGSCRWTM
TCCAGATGTT-
 A C G T A G T C G T A C C G A T A T C G A T G C G A T C T C A G C G T A A G C T G T C A
A C G T T G A C A G T C C G T A A T C G G T C A A C G T A T C G A G C T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CCWGSCRWTM--
NCTGTCAATCAN
 A G T C G T A C C G A T A T C G A T G C G A T C T C A G C G T A A G C T G T C A A C G T A C G T
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCWGSCRWTM-
GSCTGTCACTCA
 A C G T A G T C G T A C C G A T A T C G A T G C G A T C T C A G C G T A A G C T G T C A A C G T
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

TFAP4/MA0691.1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CCWGSCRWTM
ATCAGCTGTT-
 A C G T A G T C G T A C C G A T A T C G A T G C G A T C T C A G C G T A A G C T G T C A
T C G A G C A T A T G C C G T A A T C G T A G C A C G T A C T G C G A T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----CCWGSCRWTM
RYHYACCTGB-----
 A C G T A C G T A C G T A C G T A C G T A G T C G T A C C G A T A T C G A T G C G A T C T C A G C G T A A G C T G T C A
T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:7
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CCWGSCRWTM-
AAGCACCTGTCAATAT
 A C G T A C G T A C G T A C G T A C G T A G T C G T A C C G A T A T C G A T G C G A T C T C A G C G T A A G C T G T C A A C G T
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

PH0104.1_Meis2/Jaspar

Match Rank:8
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CCWGSCRWTM-
AAAGACCTGTCAATAC
 A C G T A C G T A C G T A C G T A C G T A G T C G T A C C G A T A T C G A T G C G A T C T C A G C G T A A G C T G T C A A C G T
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C

PH0140.1_Pknox1/Jaspar

Match Rank:9
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CCWGSCRWTM-
AAAGACCTGTCAATCC
 A C G T A C G T A C G T A C G T A C G T A G T C G T A C C G A T A T C G A T G C G A T C T C A G C G T A A G C T G T C A A C G T
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CCWGSCRWTM--
SCTGTCAVTCAV
 A G T C G T A C C G A T A T C G A T G C G A T C T C A G C G T A A G C T G T C A A C G T A C G T
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A