Information for 1-TGRACTTTGAMCT (Motif 1)

C A G T C A T G T C A G G T C A A T G C A G C T A C G T C A G T T A C G C T G A G T C A G T A C G A C T
Reverse Opposite:
C T G A C A T G C A G T G A C T A G T C G T C A T G C A C T G A T A C G C A G T A G T C G T A C G T C A
p-value:1e-59
log p-value:-1.373e+02
Information Content per bp:1.593
Number of Target Sequences with motif80.0
Percentage of Target Sequences with motif10.53%
Number of Background Sequences with motif401.0
Percentage of Background Sequences with motif0.82%
Average Position of motif in Targets51.2 +/- 25.6bp
Average Position of motif in Background48.6 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4G/MA0484.1/Jaspar

Match Rank:1
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:TGRACTTTGAMCT--
TGGACTTTGNNCTCN
 C A G T C A T G T C A G G T C A A T G C A G C T A C G T C A G T T A C G C T G A G T C A G T A C G A C T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:2
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:TGRACTTTGAMCT---
TGGACTTTGNNCTNTG
 C A G T C A T G T C A G G T C A A T G C A G C T A C G T C A G T T A C G C T G A G T C A G T A C G A C T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

Hnf4a/MA0114.3/Jaspar

Match Rank:3
Score:0.91
Offset:-2
Orientation:reverse strand
Alignment:--TGRACTTTGAMCT-
ATTGGACTTTGACCCC
 A C G T A C G T C A G T C A T G T C A G G T C A A T G C A G C T A C G T C A G T T A C G C T G A G T C A G T A C G A C T A C G T
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

PB0134.1_Hnf4a_2/Jaspar

Match Rank:4
Score:0.84
Offset:-4
Orientation:reverse strand
Alignment:----TGRACTTTGAMCT
NNATTGGACTTTNGNN-
 A C G T A C G T A C G T A C G T C A G T C A T G T C A G G T C A A T G C A G C T A C G T C A G T T A C G C T G A G T C A G T A C G A C T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C A C G T

RXRG/MA0856.1/Jaspar

Match Rank:5
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:TGRACTTTGAMCT-
TGACCTTTGACCCC
 C A G T C A T G T C A G G T C A A T G C A G C T A C G T C A G T T A C G C T G A G T C A G T A C G A C T A C G T
A G C T T C A G T G C A G T A C G T A C G A C T G A C T G A C T T C A G T G C A G T A C G T A C A G T C A G T C

Rxra/MA0512.2/Jaspar

Match Rank:6
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:TGRACTTTGAMCT-
TGACCTTTGACCCC
 C A G T C A T G T C A G G T C A A T G C A G C T A C G T C A G T T A C G C T G A G T C A G T A C G A C T A C G T
A G C T T C A G T G C A T G A C T A G C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C

Nr2f6/MA0677.1/Jaspar

Match Rank:7
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:TGRACTTTGAMCT-
TGACCTTTGACCTN
 C A G T C A T G T C A G G T C A A T G C A G C T A C G T C A G T T A C G C T G A G T C A G T A C G A C T A C G T
A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C

RXRB/MA0855.1/Jaspar

Match Rank:8
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:TGRACTTTGAMCT-
TGACCTTTGACCCC
 C A G T C A T G T C A G G T C A A T G C A G C T A C G T C A G T T A C G C T G A G T C A G T A C G A C T A C G T
A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G A T C A G T C A G T C

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:9
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:TGRACTTTGAMCT-
TGACCTTTGACCTC
 C A G T C A T G T C A G G T C A A T G C A G C T A C G T C A G T T A C G C T G A G T C A G T A C G A C T A C G T
G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:10
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:TGRACTTTGAMCT--
TGACCTTTGCCCTAN
 C A G T C A T G T C A G G T C A A T G C A G C T A C G T C A G T T A C G C T G A G T C A G T A C G A C T A C G T A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C