Information for 4-AYMACTAKGRGCT (Motif 3)

C G T A A G T C G T A C C G T A A G T C A C G T C G T A A C T G C T A G C T A G A C T G A G T C A C G T
Reverse Opposite:
G T C A A C T G A G T C A G T C A G T C G T A C A C G T C G T A A C T G A C G T A C T G C T A G G A C T
p-value:1e-14
log p-value:-3.237e+01
Information Content per bp:1.869
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.1 +/- 18.5bp
Average Position of motif in Background41.8 +/- 17.1bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HMBOX1/MA0895.1/Jaspar

Match Rank:1
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AYMACTAKGRGCT
GTTAACTAGN----
 A C G T C G T A A G T C G T A C C G T A A G T C A C G T C G T A A C T G C T A G C T A G A C T G A G T C A C G T
A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.54
Offset:9
Orientation:reverse strand
Alignment:AYMACTAKGRGCT-
---------NGCTN
 C G T A A G T C G T A C C G T A A G T C A C G T C G T A A C T G C T A G C T A G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

ZNF410/MA0752.1/Jaspar

Match Rank:3
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-AYMACTAKGRGCT---
GANTATTATGGGATGGA
 A C G T C G T A A G T C G T A C C G T A A G T C A C G T C G T A A C T G C T A G C T A G A C T G A G T C A C G T A C G T A C G T A C G T
C A T G T C G A C A T G G A C T C T G A A G C T A C G T C T G A C A G T A T C G A C T G C A T G G T C A C G A T C T A G A C T G T G C A

PB0181.1_Spdef_2/Jaspar

Match Rank:4
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:AYMACTAKGRGCT----
-CTACTAGGATGTNNTN
 C G T A A G T C G T A C C G T A A G T C A C G T C G T A A C T G C T A G C T A G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

Sox2/MA0143.3/Jaspar

Match Rank:5
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:AYMACTAKGRGCT
--AACAAAGG---
 C G T A A G T C G T A C C G T A A G T C A C G T C G T A A C T G C T A G C T A G A C T G A G T C A C G T
A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:6
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--AYMACTAKGRGCT-
CAATCACTGGCAGAAT
 A C G T A C G T C G T A A G T C G T A C C G T A A G T C A C G T C G T A A C T G C T A G C T A G A C T G A G T C A C G T A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

PB0071.1_Sox4_1/Jaspar

Match Rank:7
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---AYMACTAKGRGCT-
AGAAGAACAAAGGACTA
 A C G T A C G T A C G T C G T A A G T C G T A C C G T A A G T C A C G T C G T A A C T G C T A G C T A G A C T G A G T C A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0159.1_Rfx4_2/Jaspar

Match Rank:8
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---AYMACTAKGRGCT
NNNGTAACTANGNNA-
 A C G T A C G T A C G T C G T A A G T C G T A C C G T A A G T C A C G T C G T A A C T G C T A G C T A G A C T G A G T C A C G T
A C G T A T G C A T C G A C T G G A C T G T C A C G T A G T A C A G C T G C T A C A T G A T C G T A C G C A G T C G T A A C G T

CTCF/MA0139.1/Jaspar

Match Rank:9
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--AYMACTAKGRGCT----
TGGCCACCAGGGGGCGCTA
 A C G T A C G T C G T A A G T C G T A C C G T A A G T C A C G T C G T A A C T G C T A G C T A G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

PB0061.1_Sox11_1/Jaspar

Match Rank:10
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---AYMACTAKGRGCT-
ATAAGAACAAAGGACTA
 A C G T A C G T A C G T C G T A A G T C G T A C C G T A A G T C A C G T C G T A A C T G C T A G C T A G A C T G A G T C A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A