Information for 8-CCTGAGTGGCGCG (Motif 13)

A G T C A G T C A G C T A C T G C G T A A C T G A G C T A C T G A C T G A G T C A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C A C T G A G T C A G T C C T G A A G T C C G A T A G T C C T G A A C T G A C T G
p-value:1e-8
log p-value:-1.941e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets70.8 +/- 9.6bp
Average Position of motif in Background18.0 +/- 8.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0164.1_Smad3_2/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CCTGAGTGGCGCG-----
-NAGANTGGCGGGGNGNA
 A G T C A G T C A G C T A C T G C G T A A C T G A G C T A C T G A C T G A G T C A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

POL006.1_BREu/Jaspar

Match Rank:2
Score:0.64
Offset:7
Orientation:reverse strand
Alignment:CCTGAGTGGCGCG--
-------GGCGCGCT
 A G T C A G T C A G C T A C T G C G T A A C T G A G C T A C T G A C T G A G T C A C T G A G T C A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CCTGAGTGGCGCG
CTTGAGTGGCT--
 A G T C A G T C A G C T A C T G C G T A A C T G A G C T A C T G A C T G A G T C A C T G A G T C A C T G
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CCTGAGTGGCGCG--
-NNGCNCTGCGCGGC
 A G T C A G T C A G C T A C T G C G T A A C T G A G C T A C T G A C T G A G T C A C T G A G T C A C T G A C G T A C G T
A C G T T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

PB0113.1_E2F3_2/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CCTGAGTGGCGCG-----
-NNNNTTGGCGCCGANNN
 A G T C A G T C A G C T A C T G C G T A A C T G A G C T A C T G A C T G A G T C A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CCTGAGTGGCGCG
-TTRAGTGSYK--
 A G T C A G T C A G C T A C T G C G T A A C T G A G C T A C T G A C T G A G T C A C T G A G T C A C T G
A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T

PB0008.1_E2F2_1/Jaspar

Match Rank:7
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CCTGAGTGGCGCG-------
-----NTCGCGCGCCTTNNN
 A G T C A G T C A G C T A C T G C G T A A C T G A G C T A C T G A C T G A G T C A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

NFYB/MA0502.1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CCTGAGTGGCGCG---
-CTGATTGGTCNATTT
 A G T C A G T C A G C T A C T G C G T A A C T G A G C T A C T G A C T G A G T C A C T G A G T C A C T G A C G T A C G T A C G T
A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

PB0009.1_E2F3_1/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CCTGAGTGGCGCG----
--ATAAGGGCGCGCGAT
 A G T C A G T C A G C T A C T G C G T A A C T G A G C T A C T G A C T G A G T C A C T G A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CCTGAGTGGCGCG
-BTGABTGACAGS
 A G T C A G T C A G C T A C T G C G T A A C T G A G C T A C T G A C T G A G T C A C T G A G T C A C T G
A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C