Information for 6-WGTKTKATKGAAG (Motif 7)

C G A T A C T G A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G C G T A C G T A A C T G
Reverse Opposite:
G T A C A C G T A C G T A G T C G T C A C G T A A C G T G T C A C G T A G T C A C G T A A G T C C G T A
p-value:1e-13
log p-value:-2.995e+01
Information Content per bp:1.870
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.4 +/- 18.5bp
Average Position of motif in Background37.4 +/- 11.4bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0078.1_Hoxd13/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--WGTKTKATKGAAG-
NNANTTTTATTGGNNN
 A C G T A C G T C G A T A C T G A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G C G T A C G T A A C T G A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

PBX1/MA0070.1/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:WGTKTKATKGAAG-
--TTTGATTGATGN
 C G A T A C T G A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G C G T A C G T A A C T G A C G T
A C G T A C G T C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G

HOXB13/MA0901.1/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:WGTKTKATKGAAG
-NTTTTATTGG--
 C G A T A C T G A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G C G T A C G T A A C T G
A C G T C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---WGTKTKATKGAAG-
NTNAATTTTATTGNATT
 A C G T A C G T A C G T C G A T A C T G A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G C G T A C G T A A C T G A C G T
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:WGTKTKATKGAAG
-NTTTTATTGG--
 C G A T A C T G A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G C G T A C G T A A C T G
A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G A C G T A C G T

PB0197.1_Zfp105_2/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-WGTKTKATKGAAG---
NAAANTTATTGAANCAN
 A C G T C G A T A C T G A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G C G T A C G T A A C T G A C G T A C G T A C G T
G A T C G T C A T C G A G T C A T C G A C G A T A G C T T C G A A C G T A C G T A C T G T C G A T G C A A G T C G T A C T C G A G A C T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:7
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:WGTKTKATKGAAG
--TTTTATTRGN-
 C G A T A C T G A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G C G T A C G T A A C T G
A C G T A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:WGTKTKATKGAAG
-TTTTTATTGG--
 C G A T A C T G A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G C G T A C G T A A C T G
A C G T C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T A C G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:9
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:WGTKTKATKGAAG--
---ATGATKGATGRC
 C G A T A C T G A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G C G T A C G T A A C T G A C G T A C G T
A C G T A C G T A C G T C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:10
Score:0.60
Offset:3
Orientation:forward strand
Alignment:WGTKTKATKGAAG
---RTTATGYAAB
 C G A T A C T G A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G C G T A C G T A A C T G
A C G T A C G T A C G T T C A G G A C T C A G T C T G A A G C T C T A G G A C T T G C A C T G A A G T C