Information for 24-TTGTTAGTGCTGG (Motif 31)

A C G T A C G T A C T G A C G T A C G T C G T A A C T G A C G T A C T G A G T C A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A A C T G A G T C C G T A A G T C A C G T C G T A C G T A A G T C C G T A C G T A
p-value:1e-6
log p-value:-1.425e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.3 +/- 14.9bp
Average Position of motif in Background18.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0119.1_Foxa2_2/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TTGTTAGTGCTGG
NCNTTTGTTATTTNN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C T G A C G T A C T G A G T C A C G T A C T G A C T G
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T A C G T A C G T

PB0172.1_Sox1_2/Jaspar

Match Rank:2
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------TTGTTAGTGCTGG
CTATAATTGTTAGCG----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C T G A C G T A C T G A G T C A C G T A C T G A C T G
G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G A C G T A C G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TTGTTAGTGCTGG
--TTAAGTGCTT-
 A C G T A C G T A C T G A C G T A C G T C G T A A C T G A C G T A C T G A G T C A C G T A C T G A C T G
A C G T A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TTGTTAGTGCTGG
ATTGTT--------
 A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C T G A C G T A C T G A G T C A C G T A C T G A C T G
G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TTGTTAGTGCTGG
ATTGTTA-------
 A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C T G A C G T A C T G A G T C A C G T A C T G A C T G
C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TTGTTAGTGCTGG--
NNTGTTTATTTTGGCA
 A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C T G A C G T A C T G A G T C A C G T A C T G A C T G A C G T A C G T
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

PB0122.1_Foxk1_2/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TTGTTAGTGCTGG
NNNTGTTGTTGTTNG
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C T G A C G T A C T G A G T C A C G T A C T G A C T G
C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TTGTTAGTGCTGG
-RGTTAGTGCCCY
 A C G T A C G T A C T G A C G T A C G T C G T A A C T G A C G T A C T G A G T C A C G T A C T G A C T G
A C G T C T G A C T A G A C G T G A C T G T C A A C T G A G C T A C T G A T G C G T A C G T A C A G C T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:9
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TTGTTAGTGCTGG
CCATTGTTNY------
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C T G A C G T A C T G A G T C A C G T A C T G A C T G
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TTGTTAGTGCTGG
ATTGTTTAN-----
 A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C T G A C G T A C T G A G T C A C G T A C T G A C T G
G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C A C G T A C G T A C G T A C G T A C G T