Information for 18-GTTTATTAAACAGCCA (Motif 26)

A C T G A C G T A C G T A C G T C G T A A C G T C G A T C T G A T C G A C G T A A G T C C G T A A C T G A G T C G T A C C G T A
Reverse Opposite:
A C G T A C T G A C T G G T A C A C G T A C T G A C G T A G C T A G C T C G T A C G T A A C G T C G T A C G T A C G T A A G T C
p-value:1e-8
log p-value:-1.979e+01
Information Content per bp:1.928
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets68.2 +/- 22.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0001.1_Arid3a_1/Jaspar

Match Rank:1
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GTTTATTAAACAGCCA
GGGTTTAATTAAAATTC--
 A C G T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A C G T C G A T C T G A T C G A C G T A A G T C C G T A A C T G A G T C G T A C C G T A
T A C G A C T G A C T G G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A G T C A G A C T G C A T G A T C A C G T A C G T

Foxq1/MA0040.1/Jaspar

Match Rank:2
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GTTTATTAAACAGCCA
TATTGTTTATT---------
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A C G T C G A T C T G A T C G A C G T A A G T C C G T A A C T G A G T C G T A C C G T A
G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:3
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GTTTATTAAACAGCCA
----ATTAAA------
 A C T G A C G T A C G T A C G T C G T A A C G T C G A T C T G A T C G A C G T A A G T C C G T A A C T G A G T C G T A C C G T A
A C G T A C G T A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GTTTATTAAACAGCCA
NNNTTTNTAATACNG---
 A C G T A C G T A C T G A C G T A C G T A C G T C G T A A C G T C G A T C T G A T C G A C G T A A G T C C G T A A C T G A G T C G T A C C G T A
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G A C G T A C G T A C G T

PH0100.1_Lmx1a/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GTTTATTAAACAGCCA
CGAATTAATTAAAAACC--
 A C G T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A C G T C G A T C T G A T C G A C G T A A G T C C G T A A C T G A G T C G T A C C G T A
T A G C T A C G G C T A C G T A G A C T G A C T C G T A C G T A C G A T C G A T C T G A C T G A C G T A G C T A G C T A G A T C A G T C A C G T A C G T

LMX1B/MA0703.1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTTTATTAAACAGCCA
-TTAATTAN-------
 A C T G A C G T A C G T A C G T C G T A A C G T C G A T C T G A T C G A C G T A A G T C C G T A A C T G A G T C G T A C C G T A
A C G T A G C T C G A T G C T A G C T A C G A T G C A T C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

LMX1A/MA0702.1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTTTATTAAACAGCCA
-TTAATTAA-------
 A C T G A C G T A C G T A C G T C G T A A C G T C G A T C T G A T C G A C G T A A G T C C G T A A C T G A G T C G T A C C G T A
A C G T A G C T G A C T G C T A C G T A C G A T G A C T C T G A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CDX1/MA0878.1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GTTTATTAAACAGCCA
TTTTATTGC-------
 A C T G A C G T A C G T A C G T C G T A A C G T C G A T C T G A T C G A C G T A A G T C C G T A A C T G A G T C G T A C C G T A
C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0153.1_Prop1/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GTTTATTAAACAGCCA
CGAATTAATTAAGAAAC--
 A C G T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A C G T C G A T C T G A T C G A C G T A A G T C C G T A A C T G A G T C G T A C C G T A
T G A C T C A G T G C A T C G A G A C T G A C T C G T A C G T A G A C T A C G T C T G A C T G A A C T G C G T A C G T A C T G A G A T C A C G T A C G T

PH0095.1_Lhx5/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GTTTATTAAACAGCCA
CGAATTAATTAAATACT--
 A C G T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A C G T C G A T C T G A T C G A C G T A A G T C C G T A A C T G A G T C G T A C C G T A
T A G C C T A G G C T A C T G A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G C T A G C A T G T C A G T A C A G C T A C G T A C G T