Information for 17-ACTTAATGCTTWAVTT (Motif 25)

C G T A A G T C C G A T A C G T C G T A C G T A A G C T A C T G A G T C A C G T A C G T C G A T G T C A T G A C G A C T C G A T
Reverse Opposite:
C G T A C G T A A C G T A C G T G C T A C G T A C G T A A C T G T A G C C T G A C G A T A C G T C G T A C G T A C T A G A C G T
p-value:1e-8
log p-value:-1.979e+01
Information Content per bp:1.771
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.2 +/- 22.9bp
Average Position of motif in Background67.0 +/- 13.3bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:1
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:ACTTAATGCTTWAVTT
--TTAATGTTTAACC-
 C G T A A G T C C G A T A C G T C G T A C G T A A G C T A C T G A G T C A C G T A C G T C G A T G T C A T G A C G A C T C G A T
A C G T A C G T A C G T G C A T C T G A G T C A G C A T T A C G C G A T C A G T G A C T G C T A C G T A G A T C G A T C A C G T

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:2
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:ACTTAATGCTTWAVTT
--TTAATNATTAAC--
 C G T A A G T C C G A T A C G T C G T A C G T A A G C T A C T G A G T C A C G T A C G T C G A T G T C A T G A C G A C T C G A T
A C G T A C G T A C G T G A C T T C G A G T C A G C A T T A G C C G T A C A G T A G C T C G T A T G C A G A T C A C G T A C G T

Pax6/MA0069.1/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:ACTTAATGCTTWAVTT
--TTCACGCATGAGTT
 C G T A A G T C C G A T A C G T C G T A C G T A A G C T A C T G A G T C A C G T A C G T C G A T G T C A T G A C G A C T C G A T
A C G T A C G T A C G T G A C T G A T C G T C A G A T C C A T G A T G C C G T A A G C T A T C G C T G A T A C G A G C T C A G T

HNF1A/MA0046.2/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ACTTAATGCTTWAVTT
AGTTAATGATTAACT-
 C G T A A G T C C G A T A C G T C G T A C G T A A G C T A C T G A G T C A C G T A C G T C G A T G T C A T G A C G A C T C G A T
C T G A C T A G A G C T G C A T C T G A G T C A G C A T T A C G C G T A C A G T G A C T C G T A T C G A G T A C G C A T A C G T

HNF1B/MA0153.2/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:ACTTAATGCTTWAVTT
-GTTAATNATTAAC--
 C G T A A G T C C G A T A C G T C G T A C G T A A G C T A C T G A G T C A C G T A C G T C G A T G T C A T G A C G A C T C G A T
A C G T C T A G A G C T G A C T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G T A C A C G T A C G T

PH0125.1_Obox5_2/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---ACTTAATGCTTWAVTT
GATAATTAATCCCTCTT--
 A C G T A C G T A C G T C G T A A G T C C G A T A C G T C G T A C G T A A G C T A C T G A G T C A C G T A C G T C G A T G T C A T G A C G A C T C G A T
A C T G C G T A A G C T C T G A C G T A G C A T C G A T C G T A C G T A C A G T G T A C A G T C A G T C A G C T A G T C G A C T A G C T A C G T A C G T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:ACTTAATGCTTWAVTT
--NTAATKGTTT----
 C G T A A G T C C G A T A C G T C G T A C G T A A G C T A C T G A G T C A C G T A C G T C G A T G T C A T G A C G A C T C G A T
A C G T A C G T A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T A C G T A C G T A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---ACTTAATGCTTWAVTT
ACCACTTAA----------
 A C G T A C G T A C G T C G T A A G T C C G A T A C G T C G T A C G T A A G C T A C T G A G T C A C G T A C G T C G A T G T C A T G A C G A C T C G A T
T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0124.1_Obox5_1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---ACTTAATGCTTWAVTT
NANANTTAATCCCNNNN--
 A C G T A C G T A C G T C G T A A G T C C G A T A C G T C G T A C G T A A G C T A C T G A G T C A C G T A C G T C G A T G T C A T G A C G A C T C G A T
C A T G C G T A C T G A C T G A C G A T G C A T C G A T C G T A C G T A C G A T G A T C A G T C A G T C A G C T A G T C G A C T C G T A A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---ACTTAATGCTTWAVTT
ACCACTTAA----------
 A C G T A C G T A C G T C G T A A G T C C G A T A C G T C G T A C G T A A G C T A C T G A G T C A C G T A C G T C G A T G T C A T G A C G A C T C G A T
T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T