Information for 19-AAGCCACGCTAAT (Motif 24)

C G T A C G T A C T A G A G T C A G T C C G T A A T G C C T A G A G T C A C G T C T G A C G T A A C G T
Reverse Opposite:
C G T A A C G T A G C T C G T A A C T G A G T C A T C G A C G T A C T G A C T G A G T C A C G T A C G T
p-value:1e-8
log p-value:-1.979e+01
Information Content per bp:1.933
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets34.2 +/- 8.8bp
Average Position of motif in Background37.9 +/- 3.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:1
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:AAGCCACGCTAAT
----CACGCA---
 C G T A C G T A C T A G A G T C A G T C C G T A A T G C C T A G A G T C A C G T C T G A C G T A A C G T
A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T

SP4/MA0685.1/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AAGCCACGCTAAT---
TAAGCCACGCCCCCTTT
 A C G T C G T A C G T A C T A G A G T C A G T C C G T A A T G C C T A G A G T C A C G T C T G A C G T A A C G T A C G T A C G T A C G T
A G C T G C T A C T G A C T A G G T A C A G T C T G C A G T A C A C T G T A G C T G A C A G T C G T A C G A T C G C A T G A C T G A C T

PH0098.1_Lhx8/Jaspar

Match Rank:3
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AAGCCACGCTAAT-------
---CACCGCTAATTAGNNGN
 C G T A C G T A C T A G A G T C A G T C C G T A A T G C C T A G A G T C A C G T C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A T C T G C A G T A C G T A C T C A G T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A C T G A C T G A C T G C G A T

HOXA5/MA0158.1/Jaspar

Match Rank:4
Score:0.58
Offset:6
Orientation:forward strand
Alignment:AAGCCACGCTAAT-
------CACTAATT
 C G T A C G T A C T A G A G T C A G T C C G T A A T G C C T A G A G T C A C G T C T G A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T A C C T G A A T G C C G A T C G T A C T G A A C G T A C G T

PB0147.1_Max_2/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AAGCCACGCTAAT-
GTGCCACGCGACTG
 C G T A C G T A C T A G A G T C A G T C C G T A A T G C C T A G A G T C A C G T C T G A C G T A A C G T A C G T
A C T G A G C T A C T G G A T C A G T C C G T A A G T C T C A G G A T C A C T G T C G A T G A C C A G T C A T G

PB0180.1_Sp4_2/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AAGCCACGCTAAT-
NNGGCCACGCCTTTN
 A C G T C G T A C G T A C T A G A G T C A G T C C G T A A T G C C T A G A G T C A C G T C T G A C G T A A C G T A C G T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AAGCCACGCTAAT
-TBGCACGCAA--
 C G T A C G T A C T A G A G T C A G T C C G T A A T G C C T A G A G T C A C G T C T G A C G T A A C G T
A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T

PH0097.1_Lhx6_2/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:AAGCCACGCTAAT-------
---NNNCGCTAATTAGNNGA
 C G T A C G T A C T A G A G T C A G T C C G T A A T G C C T A G A G T C A C G T C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G C A G C T A G A T C G T A C T C A G G A T C G A C T T C G A C T G A A G C T A G C T C T G A C T A G A G C T C A T G A C T G C G T A

PH0032.1_Evx2/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AAGCCACGCTAAT-------
---CACCGCTAATTAGCGGT
 C G T A C G T A C T A G A G T C A G T C C G T A A T G C C T A G A G T C A C G T C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C T G C A G A T C G T A C T C A G A T G C A G C T T G C A C G T A A C G T A C G T C T G A A T C G A T G C A C T G A C G T G C A T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AAGCCACGCTAAT---
----TATGCWAATBAV
 C G T A C G T A C T A G A G T C A G T C C G T A A T G C C T A G A G T C A C G T C T G A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G