Information for 10-ATTAGCMATAGTAAAA (Motif 10)

C G T A C G A T C A G T C T G A A C T G A G T C G T A C G T C A A C G T C G T A A C T G A C G T G C T A C T G A G T C A C G T A
Reverse Opposite:
A C G T A C G T A G C T C G A T C G T A A G T C C G A T C G T A A C G T A C T G A C T G G T A C A G C T G C T A C G T A A C G T
p-value:1e-11
log p-value:-2.556e+01
Information Content per bp:1.780
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.8 +/- 18.4bp
Average Position of motif in Background63.9 +/- 6.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HMBOX1/MA0895.1/Jaspar

Match Rank:1
Score:0.58
Offset:6
Orientation:forward strand
Alignment:ATTAGCMATAGTAAAA
------ACTAGTTAAC
 C G T A C G A T C A G T C T G A A C T G A G T C G T A C G T C A A C G T C G T A A C T G A C G T G C T A C T G A G T C A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

HOXD11/MA0908.1/Jaspar

Match Rank:2
Score:0.57
Offset:7
Orientation:forward strand
Alignment:ATTAGCMATAGTAAAA-
-------GTCGTAAAAA
 C G T A C G A T C A G T C T G A A C T G A G T C G T A C G T C A A C G T C G T A A C T G A C G T G C T A C T G A G T C A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A

SOX9/MA0077.1/Jaspar

Match Rank:3
Score:0.55
Offset:5
Orientation:forward strand
Alignment:ATTAGCMATAGTAAAA
-----CCATTGTTC--
 C G T A C G A T C A G T C T G A A C T G A G T C G T A C G T C A A C G T C G T A A C T G A C G T G C T A C T G A G T C A C G T A
A C G T A C G T A C G T A C G T A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C A C G T A C G T

HOXC12/MA0906.1/Jaspar

Match Rank:4
Score:0.55
Offset:6
Orientation:forward strand
Alignment:ATTAGCMATAGTAAAA-
------GGTCGTAAAAA
 C G T A C G A T C A G T C T G A A C T G A G T C G T A C G T C A A C G T C G T A A C T G A C G T G C T A C T G A G T C A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A

HOXD12/MA0873.1/Jaspar

Match Rank:5
Score:0.54
Offset:6
Orientation:forward strand
Alignment:ATTAGCMATAGTAAAA-
------AGTCGTAAAAA
 C G T A C G A T C A G T C T G A A C T G A G T C G T A C G T C A A C G T C G T A A C T G A C G T G C T A C T G A G T C A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C A G A G C T T A G C T C A G G A C T C G T A C T G A C G T A G C T A G T C A

Sox2/MA0143.3/Jaspar

Match Rank:6
Score:0.54
Offset:5
Orientation:forward strand
Alignment:ATTAGCMATAGTAAAA
-----CCTTTGTT---
 C G T A C G A T C A G T C T G A A C T G A G T C G T A C G T C A A C G T C G T A A C T G A C G T G C T A C T G A G T C A C G T A
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T

HOXC11/MA0651.1/Jaspar

Match Rank:7
Score:0.54
Offset:6
Orientation:forward strand
Alignment:ATTAGCMATAGTAAAA-
------GGTCGTAAAAT
 C G T A C G A T C A G T C T G A A C T G A G T C G T A C G T C A A C G T C G T A A C T G A C G T G C T A C T G A G T C A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G G A C T G A T C C T A G C G A T C G T A C G T A G T C A G C T A G C A T

HOXC13/MA0907.1/Jaspar

Match Rank:8
Score:0.54
Offset:6
Orientation:forward strand
Alignment:ATTAGCMATAGTAAAA-
------GCTCGTAAAAA
 C G T A C G A T C A G T C T G A A C T G A G T C G T A C G T C A A C G T C G T A A C T G A C G T G C T A C T G A G T C A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:9
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---ATTAGCMATAGTAAAA
NNAATTAGTCACGGT----
 A C G T A C G T A C G T C G T A C G A T C A G T C T G A A C T G A G T C G T A C G T C A A C G T C G T A A C T G A C G T G C T A C T G A G T C A C G T A
A G C T G A T C T C G A C G T A A C G T A G C T C G T A A C T G G A C T G A T C G T C A G A T C C T A G A T C G G C A T A C G T A C G T A C G T A C G T

HOXC10/MA0905.1/Jaspar

Match Rank:10
Score:0.53
Offset:7
Orientation:forward strand
Alignment:ATTAGCMATAGTAAAA-
-------GTCGTAAAAT
 C G T A C G A T C A G T C T G A A C T G A G T C G T A C G T C A A C G T C G T A A C T G A C G T G C T A C T G A G T C A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G G A C T G T A C C T A G C G A T G C T A C G T A C G T A G C T A G C A T