p-value: | 1e-156 |
log p-value: | -3.606e+02 |
Information Content per bp: | 1.768 |
Number of Target Sequences with motif | 337.0 |
Percentage of Target Sequences with motif | 47.46% |
Number of Background Sequences with motif | 4024.2 |
Percentage of Background Sequences with motif | 8.95% |
Average Position of motif in Targets | 51.4 +/- 23.4bp |
Average Position of motif in Background | 49.4 +/- 34.7bp |
Strand Bias (log2 ratio + to - strand density) | 0.1 |
Multiplicity (# of sites on avg that occur together) | 1.35 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer
Match Rank: | 1 |
Score: | 0.99 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GYMATAAAAY GTCATAAAAN |
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CDX1/MA0878.1/Jaspar
Match Rank: | 2 |
Score: | 0.97 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GYMATAAAAY GCAATAAAA- |
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CDX2/MA0465.1/Jaspar
Match Rank: | 3 |
Score: | 0.97 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GYMATAAAAY AAGCCATAAAA- |
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HOXA10/MA0899.1/Jaspar
Match Rank: | 4 |
Score: | 0.96 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GYMATAAAAY GGTAATAAAAA |
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PH0013.1_Cdx2/Jaspar
Match Rank: | 5 |
Score: | 0.94 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GYMATAAAAY-- AAAGGTAATAAAATTT |
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CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer
Match Rank: | 6 |
Score: | 0.93 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GYMATAAAAY- NGYCATAAAWCH |
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PH0064.1_Hoxb9/Jaspar
Match Rank: | 7 |
Score: | 0.91 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GYMATAAAAY--- AGAGCCATAAAATTCG |
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Hoxd9/MA0913.1/Jaspar
Match Rank: | 8 |
Score: | 0.91 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GYMATAAAAY GCAATAAAAA |
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HOXD13/MA0909.1/Jaspar
Match Rank: | 9 |
Score: | 0.90 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GYMATAAAAY CCAATAAAAA |
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PH0012.1_Cdx1/Jaspar
Match Rank: | 10 |
Score: | 0.90 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GYMATAAAAY-- TAAGGTAATAAAATTA |
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