Information for 4-SRMSSTGRATTTC (Motif 10)

A T C G C T G A G T A C A T C G A T C G A C G T A C T G C T G A C G T A A C G T A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A C G T A A C G T A G C T A G T C C G T A A T G C T A G C C A T G A G C T A T G C
p-value:1e-10
log p-value:-2.376e+01
Information Content per bp:1.821
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif17.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets59.7 +/- 14.6bp
Average Position of motif in Background55.2 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RELA/MA0107.1/Jaspar

Match Rank:1
Score:0.68
Offset:4
Orientation:forward strand
Alignment:SRMSSTGRATTTC-
----GGGAATTTCC
 A T C G C T G A G T A C A T C G A T C G A C G T A C T G C T G A C G T A A C G T A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:2
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:SRMSSTGRATTTC-
----GGGAATTTCC
 A T C G C T G A G T A C A T C G A T C G A C G T A C T G C T G A C G T A A C G T A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:SRMSSTGRATTTC
-NNTGTGGATTSS
 A T C G C T G A G T A C A T C G A T C G A C G T A C T G C T G A C G T A A C G T A C G T A C G T A G T C
A C G T C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

MF0003.1_REL_class/Jaspar

Match Rank:4
Score:0.62
Offset:4
Orientation:forward strand
Alignment:SRMSSTGRATTTC-
----GGGGATTTCC
 A T C G C T G A G T A C A T C G A T C G A C G T A C T G C T G A C G T A A C G T A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

PB0171.1_Sox18_2/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:SRMSSTGRATTTC----
-GGACTGAATTCATGCC
 A T C G C T G A G T A C A T C G A T C G A C G T A C T G C T G A C G T A A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T
A C G T C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C

FOXH1/MA0479.1/Jaspar

Match Rank:6
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:SRMSSTGRATTTC-
---TGTGGATTNNN
 A T C G C T G A G T A C A T C G A T C G A C G T A C T G C T G A C G T A A C G T A C G T A C G T A G T C A C G T
A C G T A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

REL/MA0101.1/Jaspar

Match Rank:7
Score:0.61
Offset:4
Orientation:forward strand
Alignment:SRMSSTGRATTTC-
----GGGGATTTCC
 A T C G C T G A G T A C A T C G A T C G A C G T A C T G C T G A C G T A A C G T A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.59
Offset:8
Orientation:forward strand
Alignment:SRMSSTGRATTTC-----
--------ATTTCCTGTN
 A T C G C T G A G T A C A T C G A T C G A C G T A C T G C T G A C G T A A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:9
Score:0.57
Offset:3
Orientation:forward strand
Alignment:SRMSSTGRATTTC--
---NGGGGATTTCCC
 A T C G C T G A G T A C A T C G A T C G A C G T A C T G C T G A C G T A A C G T A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:10
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:SRMSSTGRATTTC
----NGGGATTA-
 A T C G C T G A G T A C A T C G A T C G A C G T A C T G C T G A C G T A A C G T A C G T A C G T A G T C
A C G T A C G T A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T