Information for 19-GAGCATGCAGHTHTTA (Motif 35)

A C T G C G T A C T A G G T A C C G T A A C G T A C T G A G T C C G T A A T C G G A C T A C G T G C T A C A G T G A C T C G T A
Reverse Opposite:
A C G T C T G A G T C A C A G T C G T A C G T A A T G C A C G T C T A G G T A C C G T A C G A T A C T G A G T C C G A T A G T C
p-value:1e-6
log p-value:-1.547e+01
Information Content per bp:1.757
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif18.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets55.8 +/- 19.8bp
Average Position of motif in Background34.6 +/- 22.3bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0146.1_Mafk_2/Jaspar

Match Rank:1
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GAGCATGCAGHTHTTA-
--CCTTGCAATTTTTNN
 A C T G C G T A C T A G G T A C C G T A A C G T A C T G A G T C C G T A A T C G G A C T A C G T G C T A C A G T G A C T C G T A A C G T
A C G T A C G T A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

PH0087.1_Irx6/Jaspar

Match Rank:2
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GAGCATGCAGHTHTTA
AAAATACATGTAAAAAT--
 A C G T A C G T A C G T A C T G C G T A C T A G G T A C C G T A A C G T A C T G A G T C C G T A A T C G G A C T A C G T G C T A C A G T G A C T C G T A
G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:3
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GAGCATGCAGHTHTTA
--ATATGCAAATNNN-
 A C T G C G T A C T A G G T A C C G T A A C G T A C T G A G T C C G T A A T C G G A C T A C G T G C T A C A G T G A C T C G T A
A C G T A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A A C G T

PH0086.1_Irx5/Jaspar

Match Rank:4
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----GAGCATGCAGHTHTTA
ANTNNTACATGTANNTN---
 A C G T A C G T A C G T A C G T A C T G C G T A C T A G G T A C C G T A A C G T A C T G A G T C C G T A A T C G G A C T A C G T G C T A C A G T G A C T C G T A
G C T A G T C A G C A T G C A T C A G T C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A C G A T G C T A G C A T G C A T A C G T A C G T A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:5
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GAGCATGCAGHTHTTA
GGGATTGCATNN----
 A C T G C G T A C T A G G T A C C G T A A C G T A C T G A G T C C G T A A T C G G A C T A C G T G C T A C A G T G A C T C G T A
T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T A C G T A C G T A C G T A C G T

PH0084.1_Irx3_2/Jaspar

Match Rank:6
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----GAGCATGCAGHTHTTA
NNTATTACATGTANNNT---
 A C G T A C G T A C G T A C G T A C T G C G T A C T A G G T A C C G T A A C G T A C T G A G T C C G T A A T C G G A C T A C G T G C T A C A G T G A C T C G T A
G C A T C T G A G C A T G C T A A C G T C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A C G A T G C T A G C A T G C A T A C G T A C G T A C G T

PH0082.1_Irx2/Jaspar

Match Rank:7
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----GAGCATGCAGHTHTTA
ANTNTTACATGTATNTA---
 A C G T A C G T A C G T A C G T A C T G C G T A C T A G G T A C C G T A A C G T A C T G A G T C C G T A A T C G G A C T A C G T G C T A C A G T G A C T C G T A
C G T A T G C A G C A T G A C T G A C T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A G A C T G C A T C G A T G C T A A C G T A C G T A C G T

PH0083.1_Irx3_1/Jaspar

Match Rank:8
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---GAGCATGCAGHTHTTA
AAAATACATGTAATACT--
 A C G T A C G T A C G T A C T G C G T A C T A G G T A C C G T A A C G T A C T G A G T C C G T A A T C G G A C T A C G T G C T A C A G T G A C T C G T A
C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.51
Offset:2
Orientation:forward strand
Alignment:GAGCATGCAGHTHTTA
--ATATGCAAAT----
 A C T G C G T A C T A G G T A C C G T A A C G T A C T G A G T C C G T A A T C G G A C T A C G T G C T A C A G T G A C T C G T A
A C G T A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GAGCATGCAGHTHTTA
--TTATGCAAAT----
 A C T G C G T A C T A G G T A C C G T A A C G T A C T G A G T C C G T A A T C G G A C T A C G T G C T A C A G T G A C T C G T A
A C G T A C G T C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T