Information for 9-CACAAGTGGG (Motif 33)

A G T C G T C A A T G C G T C A C T G A A C T G C G A T A C T G C T A G C T A G
Reverse Opposite:
A G T C G A T C G T A C C G T A A G T C A G C T A C G T A T C G A C G T A C T G
p-value:1e-7
log p-value:-1.706e+01
Information Content per bp:1.857
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.72%
Number of Background Sequences with motif88.5
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets54.7 +/- 30.6bp
Average Position of motif in Background53.8 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-3/MA0672.1/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:CACAAGTGGG
NTCAAGTGGN
 A G T C G T C A A T G C G T C A C T G A A C T G C G A T A C T G C T A G C T A G
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:2
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CACAAGTGGG
NTCAAGTGG-
 A G T C G T C A A T G C G T C A C T G A A C T G C G A T A C T G C T A G C T A G
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:3
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CACAAGTGGG-
--CAGGTGAGG
 A G T C G T C A A T G C G T C A C T G A A C T G C G A T A C T G C T A G C T A G A C G T
A C G T A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CACAAGTGGG----
ATCCACAGGTGCGAAAA
 A C G T A C G T A C G T A G T C G T C A A T G C G T C A C T G A A C T G C G A T A C T G C T A G C T A G A C G T A C G T A C G T A C G T
T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CACAAGTGGG--------
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A G T C G T C A A T G C G T C A C T G A A C T G C G A T A C T G C T A G C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

PH0111.1_Nkx2-2/Jaspar

Match Rank:6
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CACAAGTGGG---
NANTTTCAAGTGGTTAN
 A C G T A C G T A C G T A C G T A G T C G T C A A T G C G T C A C T G A A C T G C G A T A C T G C T A G C T A G A C G T A C G T A C G T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CACAAGTGGG------
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A C G T A G T C G T C A A T G C G T C A C T G A A C T G C G A T A C T G C T A G C T A G A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

CTCF/MA0139.1/Jaspar

Match Rank:8
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CACAAGTGGG-----
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A C G T A G T C G T C A A T G C G T C A C T G A A C T G C G A T A C T G C T A G C T A G A C G T A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

Mlxip/MA0622.1/Jaspar

Match Rank:9
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CACAAGTGGG
-ACACGTGC-
 A G T C G T C A A T G C G T C A C T G A A C T G C G A T A C T G C T A G C T A G
A C G T G T C A A G T C C G T A A G T C A C T G A C G T A C T G T A G C A C G T

Npas2/MA0626.1/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CACAAGTGGG
NACACGTGCN
 A G T C G T C A A T G C G T C A C T G A A C T G C G A T A C T G C T A G C T A G
A C T G T G C A A G T C C G T A A G T C A C T G A C G T A C T G A T G C G A T C