Information for 6-YCACACTGGRGAG (Motif 4)

G A C T A G T C C G T A A G T C C T G A A T G C A C G T C T A G C T A G C T G A A C T G C G T A C T A G
Reverse Opposite:
A G T C A C G T A G T C G A C T G A T C A G T C G T C A A T C G G A C T C T A G A C G T A C T G C T G A
p-value:1e-333
log p-value:-7.678e+02
Information Content per bp:1.747
Number of Target Sequences with motif185.0
Percentage of Target Sequences with motif31.62%
Number of Background Sequences with motif102.9
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets56.7 +/- 35.2bp
Average Position of motif in Background50.0 +/- 32.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI2/MA0734.1/Jaspar

Match Rank:1
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----YCACACTGGRGAG
GCGACCACACTG-----
 A C G T A C G T A C G T A C G T G A C T A G T C C G T A A G T C C T G A A T G C A C G T C T A G C T A G C T G A A C T G C G T A C T A G
C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G A C G T A C G T A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:2
Score:0.53
Offset:6
Orientation:forward strand
Alignment:YCACACTGGRGAG
------TGGGGA-
 G A C T A G T C C G T A A G T C C T G A A T G C A C G T C T A G C T A G C T G A A C T G C G T A C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:3
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:YCACACTGGRGAG
-CACGCA------
 G A C T A G T C C G T A A G T C C T G A A T G C A C G T C T A G C T A G C T G A A C T G C G T A C T A G
A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----YCACACTGGRGAG
NWAACCACADNN-----
 A C G T A C G T A C G T A C G T G A C T A G T C C G T A A G T C C T G A A T G C A C G T C T A G C T A G C T G A A C T G C G T A C T A G
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:5
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---YCACACTGGRGAG-
NNTNNACAATGGGANNN
 A C G T A C G T A C G T G A C T A G T C C G T A A G T C C T G A A T G C A C G T C T A G C T A G C T G A A C T G C G T A C T A G A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

PB0168.1_Sox14_2/Jaspar

Match Rank:6
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---YCACACTGGRGAG
CTCACACAATGGCGC-
 A C G T A C G T A C G T G A C T A G T C C G T A A G T C C T G A A T G C A C G T C T A G C T A G C T G A A C T G C G T A C T A G
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:7
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:YCACACTGGRGAG--
-CACAGCGGGGGGTC
 G A C T A G T C C G T A A G T C C T G A A T G C A C G T C T A G C T A G C T G A A C T G C G T A C T A G A C G T A C G T
A C G T T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

Sox17/MA0078.1/Jaspar

Match Rank:8
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:YCACACTGGRGAG
-GACAATGNN---
 G A C T A G T C C G T A A G T C C T G A A T G C A C G T C T A G C T A G C T G A A C T G C G T A C T A G
A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----YCACACTGGRGAG--
SMCAGTCWGAKGGAGGAGGC
 A C G T A C G T A C G T A C G T A C G T G A C T A G T C C G T A A G T C C T G A A T G C A C G T C T A G C T A G C T G A A C T G C G T A C T A G A C G T A C G T
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

MGA/MA0801.1/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:YCACACTGGRGAG
TCACACCT-----
 G A C T A G T C C G T A A G T C C T G A A T G C A C G T C T A G C T A G C T G A A C T G C G T A C T A G
G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T A C G T A C G T A C G T A C G T A C G T