Information for 23-AWGCTTTGTGACAAAG (Motif 21)

C G T A G C A T A T C G A T G C A C G T A C G T A C G T A C T G C G A T T A C G G T C A A G T C C G T A G T C A C T G A T A C G
Reverse Opposite:
A T G C G A C T A C G T A C G T C T A G A C G T A G T C C G T A A G T C G T C A G T C A C G T A T A C G A T G C C G T A C G A T
p-value:1e-9
log p-value:-2.111e+01
Information Content per bp:1.746
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.0 +/- 20.3bp
Average Position of motif in Background34.4 +/- 12.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:1
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AWGCTTTGTGACAAAG
--CCWTTGTYYB----
 C G T A G C A T A T C G A T G C A C G T A C G T A C G T A C T G C G A T T A C G G T C A A G T C C G T A G T C A C T G A T A C G
A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:2
Score:0.57
Offset:3
Orientation:forward strand
Alignment:AWGCTTTGTGACAAAG
---CTTTGT-------
 C G T A G C A T A T C G A T G C A C G T A C G T A C G T A C T G C G A T T A C G G T C A A G T C C G T A G T C A C T G A T A C G
A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:3
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AWGCTTTGTGACAAAG
--YCTTTGTTCC----
 C G T A G C A T A T C G A T G C A C G T A C G T A C G T A C T G C G A T T A C G G T C A A G T C C G T A G T C A C T G A T A C G
A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:4
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AWGCTTTGTGACAAAG
--CCTTTGTTTT----
 C G T A G C A T A T C G A T G C A C G T A C G T A C G T A C T G C G A T T A C G G T C A A G T C C G T A G T C A C T G A T A C G
A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:5
Score:0.54
Offset:9
Orientation:reverse strand
Alignment:AWGCTTTGTGACAAAG-
---------RACAAWGG
 C G T A G C A T A T C G A T G C A C G T A C G T A C G T A C T G C G A T T A C G G T C A A G T C C G T A G T C A C T G A T A C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:6
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AWGCTTTGTGACAAAG
AGGVNCCTTTGT-------
 A C G T A C G T A C G T C G T A G C A T A T C G A T G C A C G T A C G T A C G T A C T G C G A T T A C G G T C A A G T C C G T A G T C A C T G A T A C G
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:7
Score:0.53
Offset:6
Orientation:forward strand
Alignment:AWGCTTTGTGACAAAG
------GGTGCCAAGT
 C G T A G C A T A T C G A T G C A C G T A C G T A C G T A C T G C G A T T A C G G T C A A G T C C G T A G T C A C T G A T A C G
A C G T A C G T A C G T A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:8
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AWGCTTTGTGACAAAG
--CCATTGTTNY----
 C G T A G C A T A T C G A T G C A C G T A C G T A C G T A C T G C G A T T A C G G T C A A G T C C G T A G T C A C T G A T A C G
A C G T A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:AWGCTTTGTGACAAAG
AAGCTTG---------
 C G T A G C A T A T C G A T G C A C G T A C G T A C G T A C T G C G A T T A C G G T C A A G T C C G T A G T C A C T G A T A C G
C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AWGCTTTGTGACAAAG
-NNNTTTNTAATACNG
 C G T A G C A T A T C G A T G C A C G T A C G T A C G T A C T G C G A T T A C G G T C A A G T C C G T A G T C A C T G A T A C G
A C G T C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G