Information for 3-AAGGCTTTCCCACATT (Motif 2)

C T G A C T G A C T A G T C A G G A T C A G C T A G C T A C G T A G T C A G T C G A T C C T G A A G T C C T G A A G C T A C G T
Reverse Opposite:
G T C A T C G A A G C T C T A G A G C T C T A G T C A G T C A G G T C A C T G A C T G A C A T G A G T C G A T C A G C T G A C T
p-value:1e-505
log p-value:-1.163e+03
Information Content per bp:1.750
Number of Target Sequences with motif247.0
Percentage of Target Sequences with motif42.22%
Number of Background Sequences with motif84.0
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets51.1 +/- 21.9bp
Average Position of motif in Background45.1 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.64
Offset:4
Orientation:forward strand
Alignment:AAGGCTTTCCCACATT
----HTTTCCCASG--
 C T G A C T G A C T A G T C A G G A T C A G C T A G C T A C G T A G T C A G T C G A T C C T G A A G T C C T G A A G C T A C G T
A C G T A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:2
Score:0.61
Offset:4
Orientation:forward strand
Alignment:AAGGCTTTCCCACATT
----ATTTTCCATT--
 C T G A C T G A C T A G T C A G G A T C A G C T A G C T A C G T A G T C A G T C G A T C C T G A A G T C C T G A A G C T A C G T
A C G T A C G T A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T A C G T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:AAGGCTTTCCCACATT
------TTGCAACATN
 C T G A C T G A C T A G T C A G G A T C A G C T A G C T A C G T A G T C A G T C G A T C C T G A A G T C C T G A A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:4
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:AAGGCTTTCCCACATT
------TTMACACCTT
 C T G A C T G A C T A G T C A G G A T C A G C T A G C T A C G T A G T C A G T C G A T C C T G A A G T C C T G A A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T

NFATC2/MA0152.1/Jaspar

Match Rank:5
Score:0.58
Offset:5
Orientation:forward strand
Alignment:AAGGCTTTCCCACATT
-----TTTTCCA----
 C T G A C T G A C T A G T C A G G A T C A G C T A G C T A C G T A G T C A G T C G A T C C T G A A G T C C T G A A G C T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T A C G T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AAGGCTTTCCCACATT---
--NNTTTTCACACCTTNNN
 C T G A C T G A C T A G T C A G G A T C A G C T A G C T A C G T A G T C A G T C G A T C C T G A A G T C C T G A A G C T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

PH0047.1_Hoxa11/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AAGGCTTTCCCACATT-
-NNGTTTTACGACTTTA
 C T G A C T G A C T A G T C A G G A T C A G C T A G C T A C G T A G T C A G T C G A T C C T G A A G T C C T G A A G C T A C G T A C G T
A C G T G T C A G A C T C T A G C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C G T A

TBX2/MA0688.1/Jaspar

Match Rank:8
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:AAGGCTTTCCCACATT
-----TTTCACACCTN
 C T G A C T G A C T A G T C A G G A T C A G C T A G C T A C G T A G T C A G T C G A T C C T G A A G T C C T G A A G C T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T

TBR1/MA0802.1/Jaspar

Match Rank:9
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:AAGGCTTTCCCACATT
-----TTTCACACCT-
 C T G A C T G A C T A G T C A G G A T C A G C T A G C T A C G T A G T C A G T C G A T C C T G A A G T C C T G A A G C T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AAGGCTTTCCCACATT
---NTTTTCACACCTT
 C T G A C T G A C T A G T C A G G A T C A G C T A G C T A C G T A G T C A G T C G A T C C T G A A G T C C T G A A G C T A C G T
A C G T A C G T A C G T C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T