Information for 1-AGAGAACTCAYACTGG (Motif 1)

C G T A C T A G C G T A A C T G C T G A C G T A A G T C A G C T A G T C C G T A A G T C C G T A A G T C G C A T C T A G T A C G
Reverse Opposite:
A G T C A G T C C G T A A C T G A C G T C T A G A C G T A C T G C T G A T C A G A C G T A G C T A G T C A C G T A G T C G C A T
p-value:1e-580
log p-value:-1.337e+03
Information Content per bp:1.852
Number of Target Sequences with motif156.0
Percentage of Target Sequences with motif26.67%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.3 +/- 28.2bp
Average Position of motif in Background80.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0037.1_Hdx/Jaspar

Match Rank:1
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--AGAGAACTCAYACTGG
AAGGCGAAATCATCGCA-
 A C G T A C G T C G T A C T A G C G T A A C T G C T G A C G T A A G T C A G C T A G T C C G T A A G T C C G T A A G T C G C A T C T A G T A C G
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:2
Score:0.50
Offset:1
Orientation:forward strand
Alignment:AGAGAACTCAYACTGG
-AAGCACTTAA-----
 C G T A C T A G C G T A A C T G C T G A C G T A A G T C A G C T A G T C C G T A A G T C C G T A A G T C G C A T C T A G T A C G
A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T A C G T A C G T A C G T A C G T

JDP2/MA0655.1/Jaspar

Match Rank:3
Score:0.50
Offset:2
Orientation:forward strand
Alignment:AGAGAACTCAYACTGG
--ATGACTCAT-----
 C G T A C T A G C G T A A C T G C T G A C G T A A G T C A G C T A G T C C G T A A G T C C G T A A G T C G C A T C T A G T A C G
A C G T A C G T T C G A G A C T A C T G C G T A T A G C C A G T G T A C C G T A G A C T A C G T A C G T A C G T A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:4
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:AGAGAACTCAYACTGG
-------TCACACCT-
 C G T A C T A G C G T A A C T G C T G A C G T A A G T C A G C T A G T C C G T A A G T C C G T A A G T C G C A T C T A G T A C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:5
Score:0.49
Offset:2
Orientation:forward strand
Alignment:AGAGAACTCAYACTGG
--AAAAGTCAA-----
 C G T A C T A G C G T A A C T G C T G A C G T A A G T C A G C T A G T C C G T A A G T C C G T A A G T C G C A T C T A G T A C G
A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T A C G T A C G T

JUND/MA0491.1/Jaspar

Match Rank:6
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:AGAGAACTCAYACTGG
-NATGAGTCACN----
 C G T A C T A G C G T A A C T G C T G A C G T A A G T C A G C T A G T C C G T A A G T C C G T A A G T C G C A T C T A G T A C G
A C G T A T C G T C G A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G T C G A T C A C G T A C G T A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:7
Score:0.49
Offset:7
Orientation:reverse strand
Alignment:AGAGAACTCAYACTGG
-------TCACACCT-
 C G T A C T A G C G T A A C T G C T G A C G T A A G T C A G C T A G T C C G T A A G T C C G T A A G T C G C A T C T A G T A C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.48
Offset:1
Orientation:forward strand
Alignment:AGAGAACTCAYACTGG
-CGGAAGTGAAAC---
 C G T A C T A G C G T A A C T G C T G A C G T A A G T C A G C T A G T C C G T A A G T C C G T A A G T C G C A T C T A G T A C G
A C G T T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C A C G T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:9
Score:0.48
Offset:1
Orientation:forward strand
Alignment:AGAGAACTCAYACTGG
-TCCAATCCACA----
 C G T A C T A G C G T A A C T G C T G A C G T A A G T C A G C T A G T C C G T A A G T C C G T A A G T C G C A T C T A G T A C G
A C G T A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T A C G T A C G T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:10
Score:0.48
Offset:2
Orientation:forward strand
Alignment:AGAGAACTCAYACTGG
--GGAAGTGAAAST--
 C G T A C T A G C G T A A C T G C T G A C G T A A G T C A G C T A G T C C G T A A G T C C G T A A G T C G C A T C T A G T A C G
A C G T A C G T C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T A C G T A C G T