Information for 19-GAAGGAGCACTCA (Motif 36)

A T C G C G T A T C G A C T A G A C T G C G T A C T A G A T G C G T C A A G T C A G C T A G T C C G T A
Reverse Opposite:
A C G T A C T G T C G A T A C G A C G T A T C G A G T C A C G T A G T C A G T C A C G T A C G T A T G C
p-value:1e-6
log p-value:-1.552e+01
Information Content per bp:1.821
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.0 +/- 28.7bp
Average Position of motif in Background50.5 +/- 10.6bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GAAGGAGCACTCA
--GGGAGGACNG-
 A T C G C G T A T C G A C T A G A C T G C G T A C T A G A T G C G T C A A G T C A G C T A G T C C G T A
A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:2
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GAAGGAGCACTCA--
---GGACCACCCACG
 A T C G C G T A T C G A C T A G A C T G C G T A C T A G A T G C G T C A A G T C A G C T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GAAGGAGCACTCA
--CGGAGC-----
 A T C G C G T A T C G A C T A G A C T G C G T A C T A G A T G C G T C A A G T C A G C T A G T C C G T A
A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GAAGGAGCACTCA---
NNNNTGAGCACTGTNNG
 A C G T A T C G C G T A T C G A C T A G A C T G C G T A C T A G A T G C G T C A A G T C A G C T A G T C C G T A A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:5
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GAAGGAGCACTCA-
----AAGCACTTAA
 A T C G C G T A T C G A C T A G A C T G C G T A C T A G A T G C G T C A A G T C A G C T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:6
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GAAGGAGCACTCA--
----AGCCACTCAAG
 A T C G C G T A T C G A C T A G A C T G C G T A C T A G A T G C G T C A A G T C A G C T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.55
Offset:-8
Orientation:forward strand
Alignment:--------GAAGGAGCACTCA
SMCAGTCWGAKGGAGGAGGC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G C G T A T C G A C T A G A C T G C G T A C T A G A T G C G T C A A G T C A G C T A G T C C G T A
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C A C G T

E2F6/MA0471.1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GAAGGAGCACTCA
GGGCGGGAAGG----
 A C G T A C G T A T C G C G T A T C G A C T A G A C T G C G T A C T A G A T G C G T C A A G T C A G C T A G T C C G T A
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T A C G T A C G T

PH0170.1_Tgif2/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GAAGGAGCACTCA----
-AACTAGCTGTCAATAC
 A T C G C G T A T C G A C T A G A C T G C G T A C T A G A T G C G T C A A G T C A G C T A G T C C G T A A C G T A C G T A C G T A C G T
A C G T G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C

PH0102.1_Meis1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GAAGGAGCACTCA----
-AACGAGCTGTCAATAC
 A T C G C G T A T C G A C T A G A C T G C G T A C T A G A T G C G T C A A G T C A G C T A G T C C G T A A C G T A C G T A C G T A C G T
A C G T C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C