Information for 19-CCCAAATCCATTCTTC (Motif 26)

A G T C A G T C A G T C C G T A C G T A C G T A A C G T A T G C G T A C C G T A A C G T A C G T G T A C A C G T A C G T A T G C
Reverse Opposite:
T A C G C G T A C G T A A C T G C G T A C G T A C G A T A C T G A T C G C G T A A C G T A C G T A C G T C T A G A C T G A C T G
p-value:1e-8
log p-value:-1.988e+01
Information Content per bp:1.918
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.0 +/- 34.4bp
Average Position of motif in Background32.2 +/- 9.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0070.1_Sox30_1/Jaspar

Match Rank:1
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CCCAAATCCATTCTTC---
---ANNTCCATTGTTCNNN
 A G T C A G T C A G T C C G T A C G T A C G T A A C G T A T G C G T A C C G T A A C G T A C G T G T A C A C G T A C G T A T G C A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.57
Offset:6
Orientation:forward strand
Alignment:CCCAAATCCATTCTTC
------NCCATTGTTC
 A G T C A G T C A G T C C G T A C G T A C G T A A C G T A T G C G T A C C G T A A C G T A C G T G T A C A C G T A C G T A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C

PB0065.1_Sox15_1/Jaspar

Match Rank:3
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CCCAAATCCATTCTTC----
---ANNTCTATTGTTCNNNA
 A G T C A G T C A G T C C G T A C G T A C G T A A C G T A T G C G T A C C G T A A C G T A C G T G T A C A C G T A C G T A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C G T A T C G A A G C T G A T C G C A T C G T A C G A T C G A T C T A G C G A T G A C T G T A C G C T A G T A C G A C T C G T A

PB0074.1_Sox8_1/Jaspar

Match Rank:4
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CCCAAATCCATTCTTC----
---GTATCTATTGTTCTTTA
 A G T C A G T C A G T C C G T A C G T A C G T A A C G T A T G C G T A C C G T A A C G T A C G T G T A C A C G T A C G T A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T C A G T C G T A C G A T A G C T G C A T C G T A G A C T C G A T T C A G C G A T G A C T G T A C G C A T C A G T C G A T C G T A

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.56
Offset:7
Orientation:forward strand
Alignment:CCCAAATCCATTCTTC-
-------CCATTGTTYB
 A G T C A G T C A G T C C G T A C G T A C G T A A C G T A T G C G T A C C G T A A C G T A C G T G T A C A C G T A C G T A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

PB0061.1_Sox11_1/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CCCAAATCCATTCTTC----
---NNNTCCTTTGTTCTNNN
 A G T C A G T C A G T C C G T A C G T A C G T A A C G T A T G C G T A C C G T A A C G T A C G T G T A C A C G T A C G T A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

PB0173.1_Sox21_2/Jaspar

Match Rank:7
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CCCAAATCCATTCTTC-----
----AATCAATTGTTCCGCTA
 A G T C A G T C A G T C C G T A C G T A C G T A A C G T A T G C G T A C C G T A A C G T A C G T G T A C A C G T A C G T A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CCCAAATCCATTCTTC
---TAATCAATTA---
 A G T C A G T C A G T C C G T A C G T A C G T A A C G T A T G C G T A C C G T A A C G T A C G T G T A C A C G T A C G T A T G C
A C G T A C G T A C G T C G A T C T G A C G T A A G C T A G T C T G C A C T G A A C G T A G C T G C T A A C G T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:9
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:CCCAAATCCATTCTTC
------NCCATTGTTY
 A G T C A G T C A G T C C G T A C G T A C G T A A C G T A T G C G T A C C G T A A C G T A C G T G T A C A C G T A C G T A T G C
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T

SOX9/MA0077.1/Jaspar

Match Rank:10
Score:0.55
Offset:7
Orientation:forward strand
Alignment:CCCAAATCCATTCTTC
-------CCATTGTTC
 A G T C A G T C A G T C C G T A C G T A C G T A A C G T A T G C G T A C C G T A A C G T A C G T G T A C A C G T A C G T A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C