Information for 5-GTGGTTTCTC (Motif 5)

A T C G G A C T A C T G A C T G A C G T C A G T A G C T A G T C A C G T T G A C
Reverse Opposite:
A C T G C G T A A C T G C T G A G T C A G T C A T G A C A G T C C G T A A T G C
p-value:1e-12
log p-value:-2.953e+01
Information Content per bp:1.837
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.41%
Number of Background Sequences with motif110.3
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets54.6 +/- 24.8bp
Average Position of motif in Background49.4 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---GTGGTTTCTC
NNTGTGGTTT---
 A C G T A C G T A C G T A T C G G A C T A C T G A C T G A C G T C A G T A G C T A G T C A C G T T G A C
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--GTGGTTTCTC
CTGTGGTTTN--
 A C G T A C G T A T C G G A C T A C T G A C T G A C G T C A G T A G C T A G T C A C G T T G A C
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---GTGGTTTCTC
GCTGTGGTTT---
 A C G T A C G T A C G T A T C G G A C T A C T G A C T G A C G T C A G T A G C T A G T C A C G T T G A C
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----GTGGTTTCTC
GTCTGTGGTTT---
 A C G T A C G T A C G T A C G T A T C G G A C T A C T G A C T G A C G T C A G T A G C T A G T C A C G T T G A C
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----GTGGTTTCTC
NNHTGTGGTTWN--
 A C G T A C G T A C G T A C G T A T C G G A C T A C T G A C T G A C G T C A G T A G C T A G T C A C G T T G A C
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GTGGTTTCTC-
-TGGTTTCAGT
 A T C G G A C T A C T G A C T G A C G T C A G T A G C T A G T C A C G T T G A C A C G T
A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GTGGTTTCTC
TTGCGGTTT---
 A C G T A C G T A T C G G A C T A C T G A C T G A C G T C A G T A G C T A G T C A C G T T G A C
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:8
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GTGGTTTCTC
TTTGCGGTTT---
 A C G T A C G T A C G T A T C G G A C T A C T G A C T G A C G T C A G T A G C T A G T C A C G T T G A C
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTGGTTTCTC
GTGGAT----
 A T C G G A C T A C T G A C T G A C G T C A G T A G C T A G T C A C G T T G A C
A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T

PB0036.1_Irf6_1/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GTGGTTTCTC----
NNNTTGGTTTCGNTNNN
 A C G T A C G T A C G T A T C G G A C T A C T G A C T G A C G T C A G T A G C T A G T C A C G T T G A C A C G T A C G T A C G T A C G T
G C T A G T A C G C A T A C G T A G C T C T A G A C T G A C G T G C A T A C G T A G T C C T A G C T G A G A C T G A T C G C T A C A T G