Information for 12-GTTTACTCTG (Motif 17)

C A T G G C A T C A G T A C G T T C G A A G T C A C G T A G T C C G A T C A T G
Reverse Opposite:
G T A C C G T A C T A G T G C A T C A G A G C T T G C A G T C A C G T A G T A C
p-value:1e-5
log p-value:-1.347e+01
Information Content per bp:1.681
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.41%
Number of Background Sequences with motif299.6
Percentage of Background Sequences with motif0.64%
Average Position of motif in Targets43.1 +/- 27.4bp
Average Position of motif in Background51.1 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxa2/MA0047.2/Jaspar

Match Rank:1
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-GTTTACTCTG-
TGTTTACTTAGG
 A C G T C A T G G C A T C A G T A C G T T C G A A G T C A C G T A G T C C G A T C A T G A C G T
A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G

FOXA1/MA0148.3/Jaspar

Match Rank:2
Score:0.75
Offset:-5
Orientation:forward strand
Alignment:-----GTTTACTCTG
TCCATGTTTACTTTG
 A C G T A C G T A C G T A C G T A C G T C A T G G C A T C A G T A C G T T C G A A G T C A C G T A G T C C G A T C A T G
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:3
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----GTTTACTCTG-
BSNTGTTTACWYWGN
 A C G T A C G T A C G T A C G T C A T G G C A T C A G T A C G T T C G A A G T C A C G T A G T C C G A T C A T G A C G T
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GTTTACTCTG
TGTTTACTTT-
 A C G T C A T G G C A T C A G T A C G T T C G A A G T C A C G T A G T C C G A T C A T G
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:5
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GTTTACTCTG
TGTTTACTTT-
 A C G T C A T G G C A T C A G T A C G T T C G A A G T C A C G T A G T C C G A T C A T G
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---GTTTACTCTG----
NSTGTTTRCWCAGBNNN
 A C G T A C G T A C G T C A T G G C A T C A G T A C G T T C G A A G T C A C G T A G T C C G A T C A T G A C G T A C G T A C G T A C G T
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:7
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---GTTTACTCTG
CNTGTTTACATA-
 A C G T A C G T A C G T C A T G G C A T C A G T A C G T T C G A A G T C A C G T A G T C C G A T C A T G
A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A A C G T

FOXP2/MA0593.1/Jaspar

Match Rank:8
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---GTTTACTCTG
TNTGTTTACTT--
 A C G T A C G T A C G T C A T G G C A T C A G T A C G T T C G A A G T C A C G T A G T C C G A T C A T G
G A C T A G C T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C A T G A C T A C G T A C G T

Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer

Match Rank:9
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GTTTACTCTG
TGTTTACH---
 A C G T C A T G G C A T C A G T A C G T T C G A A G T C A C G T A G T C C G A T C A T G
A C G T A C T G A C G T A C G T A C G T C G T A A G T C G C T A A C G T A C G T A C G T

FOXF2/MA0030.1/Jaspar

Match Rank:10
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---GTTTACTCTG-
NTTGTTTACGTTNN
 A C G T A C G T A C G T C A T G G C A T C A G T A C G T T C G A A G T C A C G T A G T C C G A T C A T G A C G T
G C T A C G A T A C G T C T A G A C G T A C G T A C G T C G T A A G T C A T C G A C G T C A G T A C G T T C A G