Information for 1-RNTCTCGCGAGAB (Motif 1)

T C G A T C G A A C G T T G A C G C A T A G T C C A T G A G T C A C T G G C T A A C T G C T G A A T C G
Reverse Opposite:
T A G C G A C T T G A C C G A T A G T C A C T G G A T C C T A G C G T A A C T G T G C A A G C T A G C T
p-value:1e-55
log p-value:-1.280e+02
Information Content per bp:1.594
Number of Target Sequences with motif84.0
Percentage of Target Sequences with motif10.67%
Number of Background Sequences with motif476.1
Percentage of Background Sequences with motif1.02%
Average Position of motif in Targets49.2 +/- 17.1bp
Average Position of motif in Background49.5 +/- 34.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZBTB33/MA0527.1/Jaspar

Match Rank:1
Score:0.96
Offset:-2
Orientation:reverse strand
Alignment:--RNTCTCGCGAGAB
NAGNTCTCGCGAGAN
 A C G T A C G T T C G A T C G A A C G T T G A C G C A T A G T C C A T G A G T C A C T G G C T A A C T G C T G A A T C G
T A G C T C G A T C A G T C G A A G C T T G A C A G C T A G T C C T A G G A T C A C T G C T G A A C T G T C G A T C A G

GFX(?)/Promoter/Homer

Match Rank:2
Score:0.95
Offset:0
Orientation:forward strand
Alignment:RNTCTCGCGAGAB
ATTCTCGCGAGA-
 T C G A T C G A A C G T T G A C G C A T A G T C C A T G A G T C A C T G G C T A A C T G C T G A A T C G
T C G A G A C T A G C T T G A C A G C T G T A C T C A G G A T C A T C G T G C A A C T G C T G A A C G T

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.93
Offset:-1
Orientation:forward strand
Alignment:-RNTCTCGCGAGAB-
GGNTCTCGCGAGAAC
 A C G T T C G A T C G A A C G T T G A C G C A T A G T C C A T G A G T C A C T G G C T A A C T G C T G A A T C G A C G T
T A C G T C A G T G C A A G C T T G A C A G C T A G T C A C T G G A T C A C T G T C G A A C T G C T G A C T G A A T G C

Tcfl5/MA0632.1/Jaspar

Match Rank:4
Score:0.77
Offset:3
Orientation:forward strand
Alignment:RNTCTCGCGAGAB
---GGCACGTGCC
 T C G A T C G A A C G T T G A C G C A T A G T C C A T G A G T C A C T G G C T A A C T G C T G A A T C G
A C G T A C G T A C G T C T A G A C T G G T A C C T G A A G T C T C A G G A C T C A T G T G A C G A T C

ZBED1/MA0749.1/Jaspar

Match Rank:5
Score:0.70
Offset:1
Orientation:forward strand
Alignment:RNTCTCGCGAGAB-
-CTATCGCGACATA
 T C G A T C G A A C G T T G A C G C A T A G T C C A T G A G T C A C T G G C T A A C T G C T G A A T C G A C G T
A C G T G T A C C G A T T C G A G A C T A G T C T C A G G A T C T A C G T C G A G A T C G C T A A C G T C T G A

Mitf/MA0620.1/Jaspar

Match Rank:6
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:RNTCTCGCGAGAB-
----NCACGTGACN
 T C G A T C G A A C G T T G A C G C A T A G T C C A T G A G T C A C T G G C T A A C T G C T G A A T C G A C G T
A C G T A C G T A C G T A C G T A G T C G T A C C G T A A G T C T C A G C A G T A C T G T G C A A G T C G A T C

TFE3/MA0831.1/Jaspar

Match Rank:7
Score:0.67
Offset:3
Orientation:forward strand
Alignment:RNTCTCGCGAGAB
---ATCACGTGAC
 T C G A T C G A A C G T T G A C G C A T A G T C C A T G A G T C A C T G G C T A A C T G C T G A A T C G
A C G T A C G T A C G T T C G A A G C T A T G C G C T A A G T C T C A G G C A T A C T G T G C A G A T C

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:8
Score:0.67
Offset:5
Orientation:forward strand
Alignment:RNTCTCGCGAGAB
-----TGCGTG--
 T C G A T C G A A C G T T G A C G C A T A G T C C A T G A G T C A C T G G C T A A C T G C T G A A T C G
A C G T A C G T A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T

Hes1/MA1099.1/Jaspar

Match Rank:9
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:RNTCTCGCGAGAB
---NNCGCGTGNN
 T C G A T C G A A C G T T G A C G C A T A G T C C A T G A G T C A C T G G C T A A C T G C T G A A T C G
A C G T A C G T A C G T C A T G C T G A T G A C C T A G A G T C T C A G G A C T C T A G A T G C A T G C

Arntl/MA0603.1/Jaspar

Match Rank:10
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:RNTCTCGCGAGAB-
----NCACGTGACN
 T C G A T C G A A C G T T G A C G C A T A G T C C A T G A G T C A C T G G C T A A C T G C T G A A T C G A C G T
A C G T A C G T A C G T A C G T C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C