Information for 5-TCTGCGTCCBCGG (Motif 6)

A G C T A G T C A G C T A T C G A G T C A C T G A C G T A G T C A G T C A C T G T G A C A T C G A C T G
Reverse Opposite:
A G T C A T G C A C T G T A G C C T A G A C T G G T C A A G T C A C T G A T G C C T G A A C T G C T G A
p-value:1e-11
log p-value:-2.696e+01
Information Content per bp:1.843
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif8.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets41.2 +/- 24.4bp
Average Position of motif in Background56.2 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HINFP/MA0131.2/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TCTGCGTCCBCGG
-CAACGTCCGCGG
 A G C T A G T C A G C T A T C G A G T C A C T G A C G T A G T C A G T C A C T G T G A C A T C G A C T G
A C G T A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G

PB0108.1_Atf1_2/Jaspar

Match Rank:2
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TCTGCGTCCBCGG
NTTATTCGTCATNC-
 A C G T A C G T A G C T A G T C A G C T A T C G A G T C A C T G A C G T A G T C A G T C A C T G T G A C A T C G A C T G
C A T G G C A T G C A T T C G A G A C T C A G T A G T C T A C G G A C T G A T C T C G A A G C T G A C T A T G C A C G T

Atf1/MA0604.1/Jaspar

Match Rank:3
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TCTGCGTCCBCGG
--TACGTCAT---
 A G C T A G T C A G C T A T C G A G T C A C T G A C G T A G T C A G T C A C T G T G A C A T C G A C T G
A C G T A C G T A G C T C T G A A G T C A C T G A C G T T G A C C G T A A G C T A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:4
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:TCTGCGTCCBCGG
GCTCCGCCCMCY-
 A G C T A G T C A G C T A T C G A G T C A C T G A C G T A G T C A G T C A C T G T G A C A T C G A C T G
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T

EGR2/MA0472.2/Jaspar

Match Rank:5
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:TCTGCGTCCBCGG
--TGCGTGGGCGT
 A G C T A G T C A G C T A T C G A G T C A C T G A C G T A G T C A G T C A C T G T G A C A T C G A C T G
A C G T A C G T G A C T T C A G G T A C T C A G A C G T T C A G A C T G T C A G G A T C T C A G C A G T

Gmeb1/MA0615.1/Jaspar

Match Rank:6
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---TCTGCGTCCBCGG-
GAGTGTACGTAAGATGG
 A C G T A C G T A C G T A G C T A G T C A G C T A T C G A G T C A C T G A C G T A G T C A G T C A C T G T G A C A T C G A C T G A C G T
A T C G G T C A A C T G A C G T C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T A C G C G T A A G C T T C A G A T C G

PB0027.1_Gmeb1_1/Jaspar

Match Rank:7
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---TCTGCGTCCBCGG-
GAGTGTACGTAAGATGG
 A C G T A C G T A C G T A G C T A G T C A G C T A T C G A G T C A C T G A C G T A G T C A G T C A C T G T G A C A T C G A C T G A C G T
A T C G G T C A A C T G A C G T C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T A C G C G T A A G C T T C A G A T C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----TCTGCGTCCBCGG
VBSYGTCTGG--------
 A C G T A C G T A C G T A C G T A C G T A G C T A G T C A G C T A T C G A G T C A C T G A C G T A G T C A G T C A C T G T G A C A T C G A C T G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--TCTGCGTCCBCGG
CAGCTGTTTCCT---
 A C G T A C G T A G C T A G T C A G C T A T C G A G T C A C T G A C G T A G T C A G T C A C T G T G A C A T C G A C T G
G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:10
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--TCTGCGTCCBCGG
TGCCTGCGYCMCCTT
 A C G T A C G T A G C T A G T C A G C T A T C G A G T C A C T G A C G T A G T C A G T C A C T G T G A C A T C G A C T G
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T