Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer | 1e-241 | -5.570e+02 | 0.0000 | 298.0 | 44.88% | 1571.3 | 3.52% | motif file (matrix) |
svg |
2 |
| Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-227 | -5.249e+02 | 0.0000 | 246.0 | 37.05% | 937.1 | 2.10% | motif file (matrix) |
svg |
3 |
| CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer | 1e-210 | -4.836e+02 | 0.0000 | 299.0 | 45.03% | 2057.9 | 4.61% | motif file (matrix) |
svg |
4 |
| c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer | 1e-188 | -4.330e+02 | 0.0000 | 278.0 | 41.87% | 1999.1 | 4.48% | motif file (matrix) |
svg |
5 |
| n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer | 1e-173 | -3.998e+02 | 0.0000 | 277.0 | 41.72% | 2249.6 | 5.04% | motif file (matrix) |
svg |
6 |
| bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer | 1e-173 | -3.990e+02 | 0.0000 | 226.0 | 34.04% | 1244.2 | 2.79% | motif file (matrix) |
svg |
7 |
| TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer | 1e-159 | -3.671e+02 | 0.0000 | 129.0 | 19.43% | 215.2 | 0.48% | motif file (matrix) |
svg |
8 |
| Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer | 1e-158 | -3.650e+02 | 0.0000 | 255.0 | 38.40% | 2057.9 | 4.61% | motif file (matrix) |
svg |
9 |
| E-box(bHLH)/Promoter/Homer | 1e-150 | -3.471e+02 | 0.0000 | 133.0 | 20.03% | 283.9 | 0.64% | motif file (matrix) |
svg |
10 |
| BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer | 1e-132 | -3.056e+02 | 0.0000 | 338.0 | 50.90% | 5280.8 | 11.84% | motif file (matrix) |
svg |
11 |
| NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer | 1e-123 | -2.846e+02 | 0.0000 | 265.0 | 39.91% | 3201.7 | 7.18% | motif file (matrix) |
svg |
12 |
| NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer | 1e-121 | -2.795e+02 | 0.0000 | 314.0 | 47.29% | 4878.6 | 10.94% | motif file (matrix) |
svg |
13 |
| MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer | 1e-119 | -2.746e+02 | 0.0000 | 225.0 | 33.89% | 2232.9 | 5.00% | motif file (matrix) |
svg |
14 |
| c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer | 1e-57 | -1.315e+02 | 0.0000 | 131.0 | 19.73% | 1561.6 | 3.50% | motif file (matrix) |
svg |
15 |
| CRE(bZIP)/Promoter/Homer | 1e-43 | -1.011e+02 | 0.0000 | 85.0 | 12.80% | 801.9 | 1.80% | motif file (matrix) |
svg |
16 |
| HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer | 1e-11 | -2.677e+01 | 0.0000 | 126.0 | 18.98% | 4463.5 | 10.00% | motif file (matrix) |
svg |
17 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-10 | -2.334e+01 | 0.0000 | 19.0 | 2.86% | 180.4 | 0.40% | motif file (matrix) |
svg |
18 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-9 | -2.190e+01 | 0.0000 | 46.0 | 6.93% | 1069.0 | 2.40% | motif file (matrix) |
svg |
19 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-8 | -1.977e+01 | 0.0000 | 31.0 | 4.67% | 585.4 | 1.31% | motif file (matrix) |
svg |
20 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-8 | -1.886e+01 | 0.0000 | 45.0 | 6.78% | 1139.5 | 2.55% | motif file (matrix) |
svg |
21 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-8 | -1.876e+01 | 0.0000 | 49.0 | 7.38% | 1308.6 | 2.93% | motif file (matrix) |
svg |
22 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-8 | -1.870e+01 | 0.0000 | 25.0 | 3.77% | 414.2 | 0.93% | motif file (matrix) |
svg |
23 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-8 | -1.865e+01 | 0.0000 | 37.0 | 5.57% | 833.2 | 1.87% | motif file (matrix) |
svg |
24 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-7 | -1.772e+01 | 0.0000 | 39.0 | 5.87% | 942.5 | 2.11% | motif file (matrix) |
svg |
25 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-7 | -1.673e+01 | 0.0000 | 38.0 | 5.72% | 939.9 | 2.11% | motif file (matrix) |
svg |
26 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-7 | -1.628e+01 | 0.0000 | 22.0 | 3.31% | 372.7 | 0.84% | motif file (matrix) |
svg |
27 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-6 | -1.428e+01 | 0.0000 | 19.0 | 2.86% | 321.9 | 0.72% | motif file (matrix) |
svg |
28 |
| Sp1(Zf)/Promoter/Homer | 1e-5 | -1.301e+01 | 0.0000 | 30.0 | 4.52% | 760.1 | 1.70% | motif file (matrix) |
svg |
29 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-5 | -1.281e+01 | 0.0000 | 68.0 | 10.24% | 2533.2 | 5.68% | motif file (matrix) |
svg |
30 |
| Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer | 1e-4 | -1.044e+01 | 0.0004 | 7.0 | 1.05% | 57.1 | 0.13% | motif file (matrix) |
svg |
31 |
| Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-4 | -1.025e+01 | 0.0004 | 41.0 | 6.17% | 1385.2 | 3.10% | motif file (matrix) |
svg |
32 |
| HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer | 1e-4 | -9.949e+00 | 0.0005 | 35.0 | 5.27% | 1122.8 | 2.52% | motif file (matrix) |
svg |
33 |
| NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer | 1e-4 | -9.343e+00 | 0.0010 | 7.0 | 1.05% | 68.9 | 0.15% | motif file (matrix) |
svg |
34 |
| Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer | 1e-3 | -9.119e+00 | 0.0012 | 93.0 | 14.01% | 4232.3 | 9.49% | motif file (matrix) |
svg |
35 |
| KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer | 1e-3 | -8.992e+00 | 0.0013 | 66.0 | 9.94% | 2759.6 | 6.19% | motif file (matrix) |
svg |
36 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-3 | -8.583e+00 | 0.0019 | 28.0 | 4.22% | 878.1 | 1.97% | motif file (matrix) |
svg |
37 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-3 | -8.569e+00 | 0.0019 | 159.0 | 23.95% | 8191.0 | 18.36% | motif file (matrix) |
svg |
38 |
| Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-3 | -8.490e+00 | 0.0020 | 40.0 | 6.02% | 1456.1 | 3.26% | motif file (matrix) |
svg |
39 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-3 | -8.409e+00 | 0.0021 | 30.0 | 4.52% | 980.3 | 2.20% | motif file (matrix) |
svg |
40 |
| KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer | 1e-3 | -8.383e+00 | 0.0021 | 33.0 | 4.97% | 1123.3 | 2.52% | motif file (matrix) |
svg |
41 |
| HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer | 1e-3 | -8.377e+00 | 0.0021 | 112.0 | 16.87% | 5420.6 | 12.15% | motif file (matrix) |
svg |
42 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-3 | -8.370e+00 | 0.0021 | 86.0 | 12.95% | 3929.6 | 8.81% | motif file (matrix) |
svg |
43 |
| YY1(Zf)/Promoter/Homer | 1e-3 | -7.686e+00 | 0.0039 | 9.0 | 1.36% | 148.1 | 0.33% | motif file (matrix) |
svg |
44 |
| CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer | 1e-3 | -7.419e+00 | 0.0050 | 15.0 | 2.26% | 372.9 | 0.84% | motif file (matrix) |
svg |
45 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-3 | -7.317e+00 | 0.0054 | 144.0 | 21.69% | 7498.5 | 16.81% | motif file (matrix) |
svg |
46 |
| MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer | 1e-3 | -6.925e+00 | 0.0078 | 15.0 | 2.26% | 391.3 | 0.88% | motif file (matrix) |
svg |
47 |
| Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer | 1e-2 | -6.899e+00 | 0.0078 | 60.0 | 9.04% | 2654.9 | 5.95% | motif file (matrix) |
svg |
48 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-2 | -6.609e+00 | 0.0102 | 39.0 | 5.87% | 1556.2 | 3.49% | motif file (matrix) |
svg |
49 |
| Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer | 1e-2 | -6.563e+00 | 0.0105 | 26.0 | 3.92% | 906.9 | 2.03% | motif file (matrix) |
svg |
50 |
| Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer | 1e-2 | -6.488e+00 | 0.0111 | 9.0 | 1.36% | 176.9 | 0.40% | motif file (matrix) |
svg |
51 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-2 | -6.478e+00 | 0.0111 | 46.0 | 6.93% | 1938.4 | 4.34% | motif file (matrix) |
svg |
52 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-2 | -6.274e+00 | 0.0132 | 51.0 | 7.68% | 2230.2 | 5.00% | motif file (matrix) |
svg |
53 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-2 | -6.081e+00 | 0.0157 | 34.0 | 5.12% | 1344.0 | 3.01% | motif file (matrix) |
svg |
54 |
| KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer | 1e-2 | -5.988e+00 | 0.0169 | 73.0 | 10.99% | 3503.5 | 7.85% | motif file (matrix) |
svg |
55 |
| ETS(ETS)/Promoter/Homer | 1e-2 | -5.933e+00 | 0.0175 | 22.0 | 3.31% | 756.0 | 1.69% | motif file (matrix) |
svg |
56 |
| EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer | 1e-2 | -5.882e+00 | 0.0181 | 57.0 | 8.58% | 2608.7 | 5.85% | motif file (matrix) |
svg |
57 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-2 | -5.859e+00 | 0.0182 | 44.0 | 6.63% | 1894.9 | 4.25% | motif file (matrix) |
svg |
58 |
| Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967) | 1e-2 | -5.792e+00 | 0.0192 | 42.0 | 6.33% | 1793.3 | 4.02% | motif file (matrix) |
svg |
59 |
| ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer | 1e-2 | -5.502e+00 | 0.0252 | 31.0 | 4.67% | 1238.7 | 2.78% | motif file (matrix) |
svg |
60 |
| RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer | 1e-2 | -5.446e+00 | 0.0262 | 8.0 | 1.20% | 169.7 | 0.38% | motif file (matrix) |
svg |
61 |
| Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.332e+00 | 0.0289 | 5.0 | 0.75% | 72.5 | 0.16% | motif file (matrix) |
svg |
62 |
| PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-2 | -5.288e+00 | 0.0297 | 24.0 | 3.61% | 898.9 | 2.01% | motif file (matrix) |
svg |
63 |
| Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer | 1e-2 | -5.016e+00 | 0.0383 | 36.0 | 5.42% | 1550.9 | 3.48% | motif file (matrix) |
svg |
64 |
| Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer | 1e-2 | -4.944e+00 | 0.0405 | 15.0 | 2.26% | 485.1 | 1.09% | motif file (matrix) |
svg |
65 |
| SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer | 1e-2 | -4.871e+00 | 0.0429 | 14.0 | 2.11% | 443.0 | 0.99% | motif file (matrix) |
svg |
66 |
| NFY(CCAAT)/Promoter/Homer | 1e-2 | -4.751e+00 | 0.0477 | 37.0 | 5.57% | 1633.4 | 3.66% | motif file (matrix) |
svg |
67 |
| Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer | 1e-2 | -4.645e+00 | 0.0522 | 16.0 | 2.41% | 550.2 | 1.23% | motif file (matrix) |
svg |