Information for 18-CTGACTTTTCCCTCAA (Motif 28)

A G T C A C G T A C T G C T G A A G T C A G C T A C G T A C G T A C G T A G T C A G T C A G T C A C G T A G T C C G T A C G T A
Reverse Opposite:
C G A T C G A T C T A G C G T A A C T G A C T G A C T G C G T A G T C A C G T A C T G A A C T G G A C T A G T C C G T A A C T G
p-value:1e-7
log p-value:-1.727e+01
Information Content per bp:1.912
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.4 +/- 16.0bp
Average Position of motif in Background37.7 +/- 14.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CTGACTTTTCCCTCAA
-TGACCTTTNCNT---
 A G T C A C G T A C T G C T G A A G T C A G C T A C G T A C G T A C G T A G T C A G T C A G T C A C G T A G T C C G T A C G T A
A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T A C G T A C G T A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CTGACTTTTCCCTCAA
-TGACCTTTGCCCCA-
 A G T C A C G T A C T G C T G A A G T C A G C T A C G T A C G T A C G T A G T C A G T C A G T C A C G T A G T C C G T A C G T A
A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CTGACTTTTCCCTCAA
TTGACTTTT-------
 A G T C A C G T A C T G C T G A A G T C A G C T A C G T A C G T A C G T A G T C A G T C A G T C A C G T A G T C C G T A C G T A
C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTGACTTTTCCCTCAA
-TGACCTTTGCCCTA-
 A G T C A C G T A C T G C T G A A G T C A G C T A C G T A C G T A C G T A G T C A G T C A G T C A C G T A G T C C G T A C G T A
A C G T A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTGACTTTTCCCTCAA
-TGACCTTTGCCCTAN
 A G T C A C G T A C T G C T G A A G T C A G C T A C G T A C G T A C G T A G T C A G T C A G T C A C G T A G T C C G T A C G T A
A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

NFATC2/MA0152.1/Jaspar

Match Rank:6
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CTGACTTTTCCCTCAA
-----TTTTCCA----
 A G T C A C G T A C T G C T G A A G T C A G C T A C G T A C G T A C G T A G T C A G T C A G T C A C G T A G T C C G T A C G T A
A C G T A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T A C G T A C G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:7
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CTGACTTTTCCCTCAA
----VDTTTCCCGCCA
 A G T C A C G T A C T G C T G A A G T C A G C T A C G T A C G T A C G T A G T C A G T C A G T C A C G T A G T C C G T A C G T A
A C G T A C G T A C G T A C G T T A G C C G A T A C G T A G C T A G C T A G T C A T G C A G T C A C T G A T G C A T G C G C T A

NFAT5/MA0606.1/Jaspar

Match Rank:8
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CTGACTTTTCCCTCAA
----ATTTTCCATT--
 A G T C A C G T A C T G C T G A A G T C A G C T A C G T A C G T A C G T A G T C A G T C A G T C A C G T A G T C C G T A C G T A
A C G T A C G T A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CTGACTTTTCCCTCAA
-----NYTTCCCGCC-
 A G T C A C G T A C T G C T G A A G T C A G C T A C G T A C G T A C G T A G T C A G T C A G T C A C G T A G T C C G T A C G T A
A C G T A C G T A C G T A C G T A C G T T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CTGACTTTTCCCTCAA
-TGACCTTGACCT---
 A G T C A C G T A C T G C T G A A G T C A G C T A C G T A C G T A C G T A G T C A G T C A G T C A C G T A G T C C G T A C G T A
A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T A C G T A C G T